Gene
RNA
| Item | Value |
|---|---|
| gene id | G1378656 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 44792294 ~ 44792544 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1574873 | True | 203 | lncRNA | 0.50 | 2 | 44792294 | 44792544 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cd34a | cd34a | coding | downstream | 196081 | 44560201 ~ 44596213 (-) |
| LOC110492088 | NA | coding | downstream | 251537 | 44538351 ~ 44540757 (-) |
| LOC118939541 | NA | coding | downstream | 297026 | 44489262 ~ 44495268 (-) |
| LOC110492087 | NA | coding | downstream | 326553 | 44461373 ~ 44465741 (-) |
| LOC110492085 | ptn12 | coding | downstream | 342800 | 44429876 ~ 44449494 (-) |
| LOC110492092 | LOC106567333 | coding | upstream | 511176 | 45303720 ~ 45307537 (-) |
| LOC110492093 | LOC106567160 | coding | upstream | 515802 | 45308346 ~ 45315784 (-) |
| slc48a1a | LOC106567162 | coding | upstream | 523404 | 45315947 ~ 45320378 (-) |
| itga5 | LOC106567163 | coding | upstream | 585721 | 45378265 ~ 45432804 (-) |
| LOC118939605 | NA | coding | upstream | 663018 | 45455562 ~ 45455616 (-) |
| G1378654 | NA | non-coding | downstream | 7281 | 44784799 ~ 44785013 (-) |
| G1378652 | NA | non-coding | downstream | 11314 | 44780781 ~ 44780980 (-) |
| G1378644 | NA | non-coding | downstream | 28126 | 44763965 ~ 44764168 (-) |
| G1378637 | NA | non-coding | downstream | 38508 | 44753516 ~ 44753786 (-) |
| G1378636 | NA | non-coding | downstream | 44379 | 44747490 ~ 44747915 (-) |
| G1378668 | NA | non-coding | upstream | 29282 | 44821826 ~ 44822034 (-) |
| G1378676 | NA | non-coding | upstream | 49996 | 44842540 ~ 44842747 (-) |
| G1378677 | NA | non-coding | upstream | 50462 | 44843006 ~ 44843310 (-) |
| G1378684 | NA | non-coding | upstream | 57941 | 44850485 ~ 44850746 (-) |
| G1378692 | NA | non-coding | upstream | 66951 | 44859495 ~ 44859796 (-) |
| G1378530 | NA | other | downstream | 238747 | 44553014 ~ 44553547 (-) |
| G1377482 | NA | other | downstream | 1099456 | 43692320 ~ 43692838 (-) |
| G1376991 | NA | other | downstream | 1453739 | 43337162 ~ 43338555 (-) |
| LOC110492063 | LOC106567124 | other | downstream | 1567911 | 43217803 ~ 43243705 (-) |
| G1376748 | NA | other | downstream | 1622252 | 43159512 ~ 43170042 (-) |
| plxna2 | LOC106567158 | other | upstream | 125469 | 44621739 ~ 44964691 (-) |
| LOC110492109 | LOC106567177 | other | upstream | 825673 | 45613938 ~ 45627786 (-) |
| G1380431 | NA | other | upstream | 912566 | 45705110 ~ 45705453 (-) |
| LOC110492748 | ppdpf | other | upstream | 1624016 | 46416560 ~ 46419996 (-) |
