Gene
RNA
| Item | Value |
|---|---|
| gene id | G1379007 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 45177192 ~ 45177612 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1575251 | True | 421 | lncRNA | 0.37 | 1 | 45177192 | 45177612 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| plxna2 | LOC106567158 | coding | downstream | 212501 | 44621739 ~ 44964691 (-) |
| cd34a | cd34a | coding | downstream | 580979 | 44560201 ~ 44596213 (-) |
| LOC110492088 | NA | coding | downstream | 636435 | 44538351 ~ 44540757 (-) |
| LOC118939541 | NA | coding | downstream | 681924 | 44489262 ~ 44495268 (-) |
| LOC110492087 | NA | coding | downstream | 711451 | 44461373 ~ 44465741 (-) |
| LOC110492092 | LOC106567333 | coding | upstream | 126108 | 45303720 ~ 45307537 (-) |
| LOC110492093 | LOC106567160 | coding | upstream | 130734 | 45308346 ~ 45315784 (-) |
| slc48a1a | LOC106567162 | coding | upstream | 138336 | 45315947 ~ 45320378 (-) |
| itga5 | LOC106567163 | coding | upstream | 200653 | 45378265 ~ 45432804 (-) |
| LOC118939605 | NA | coding | upstream | 277950 | 45455562 ~ 45455616 (-) |
| G1378990 | NA | non-coding | downstream | 11146 | 45165752 ~ 45166046 (-) |
| G1378989 | NA | non-coding | downstream | 14404 | 45162440 ~ 45162788 (-) |
| G1378980 | NA | non-coding | downstream | 21516 | 45155387 ~ 45155676 (-) |
| G1378979 | NA | non-coding | downstream | 22206 | 45154778 ~ 45154986 (-) |
| G1378923 | NA | non-coding | downstream | 75833 | 45101152 ~ 45101359 (-) |
| G1379017 | NA | non-coding | upstream | 4167 | 45181779 ~ 45182003 (-) |
| G1379060 | NA | non-coding | upstream | 35150 | 45212762 ~ 45213108 (-) |
| G1379076 | NA | non-coding | upstream | 49783 | 45227395 ~ 45227616 (-) |
| G1379089 | NA | non-coding | upstream | 59142 | 45236754 ~ 45237000 (-) |
| G1380277 | NA | non-coding | upstream | 210942 | 45388554 ~ 45388866 (-) |
| G1378530 | NA | other | downstream | 623645 | 44553014 ~ 44553547 (-) |
| G1377482 | NA | other | downstream | 1484354 | 43692320 ~ 43692838 (-) |
| G1376991 | NA | other | downstream | 1838637 | 43337162 ~ 43338555 (-) |
| LOC110492063 | LOC106567124 | other | downstream | 1952809 | 43217803 ~ 43243705 (-) |
| LOC110492109 | LOC106567177 | other | upstream | 440605 | 45613938 ~ 45627786 (-) |
| G1380431 | NA | other | upstream | 527498 | 45705110 ~ 45705453 (-) |
| LOC110492748 | ppdpf | other | upstream | 1238948 | 46416560 ~ 46419996 (-) |
| LOC110492764 | fkb1a | other | upstream | 1421085 | 46598697 ~ 46601691 (-) |
