Gene
RNA
| Item | Value |
|---|---|
| gene id | G1379060 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 45212762 ~ 45213108 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1575304 | True | 347 | lncRNA | 0.54 | 1 | 45212762 | 45213108 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| plxna2 | LOC106567158 | coding | downstream | 248071 | 44621739 ~ 44964691 (-) |
| cd34a | cd34a | coding | downstream | 616549 | 44560201 ~ 44596213 (-) |
| LOC110492088 | NA | coding | downstream | 672005 | 44538351 ~ 44540757 (-) |
| LOC118939541 | NA | coding | downstream | 717494 | 44489262 ~ 44495268 (-) |
| LOC110492087 | NA | coding | downstream | 747021 | 44461373 ~ 44465741 (-) |
| LOC110492092 | LOC106567333 | coding | upstream | 90612 | 45303720 ~ 45307537 (-) |
| LOC110492093 | LOC106567160 | coding | upstream | 95238 | 45308346 ~ 45315784 (-) |
| slc48a1a | LOC106567162 | coding | upstream | 102840 | 45315947 ~ 45320378 (-) |
| itga5 | LOC106567163 | coding | upstream | 165157 | 45378265 ~ 45432804 (-) |
| LOC118939605 | NA | coding | upstream | 242454 | 45455562 ~ 45455616 (-) |
| G1379017 | NA | non-coding | downstream | 30759 | 45181779 ~ 45182003 (-) |
| G1379007 | NA | non-coding | downstream | 35150 | 45177192 ~ 45177612 (-) |
| G1378990 | NA | non-coding | downstream | 46716 | 45165752 ~ 45166046 (-) |
| G1378989 | NA | non-coding | downstream | 49974 | 45162440 ~ 45162788 (-) |
| G1378980 | NA | non-coding | downstream | 57086 | 45155387 ~ 45155676 (-) |
| G1379076 | NA | non-coding | upstream | 14287 | 45227395 ~ 45227616 (-) |
| G1379089 | NA | non-coding | upstream | 23646 | 45236754 ~ 45237000 (-) |
| G1380277 | NA | non-coding | upstream | 175446 | 45388554 ~ 45388866 (-) |
| G1380287 | NA | non-coding | upstream | 189709 | 45402817 ~ 45403068 (-) |
| pou6f1 | LOC106567168 | non-coding | upstream | 312881 | 45525987 ~ 45536632 (-) |
| G1378530 | NA | other | downstream | 659215 | 44553014 ~ 44553547 (-) |
| G1377482 | NA | other | downstream | 1519924 | 43692320 ~ 43692838 (-) |
| G1376991 | NA | other | downstream | 1874207 | 43337162 ~ 43338555 (-) |
| LOC110492063 | LOC106567124 | other | downstream | 1988379 | 43217803 ~ 43243705 (-) |
| LOC110492109 | LOC106567177 | other | upstream | 405109 | 45613938 ~ 45627786 (-) |
| G1380431 | NA | other | upstream | 492002 | 45705110 ~ 45705453 (-) |
| LOC110492748 | ppdpf | other | upstream | 1203452 | 46416560 ~ 46419996 (-) |
| LOC110492764 | fkb1a | other | upstream | 1385589 | 46598697 ~ 46601691 (-) |
