Gene
RNA
| Item | Value |
|---|---|
| gene id | G1380277 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 45388554 ~ 45388866 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1576670 | True | 272 | lncRNA | 0.45 | 2 | 45388554 | 45388866 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc48a1a | LOC106567162 | coding | downstream | 68178 | 45315947 ~ 45320378 (-) |
| LOC110492093 | LOC106567160 | coding | downstream | 72770 | 45308346 ~ 45315784 (-) |
| LOC110492092 | LOC106567333 | coding | downstream | 81017 | 45303720 ~ 45307537 (-) |
| plxna2 | LOC106567158 | coding | downstream | 423863 | 44621739 ~ 44964691 (-) |
| cd34a | cd34a | coding | downstream | 792341 | 44560201 ~ 44596213 (-) |
| LOC118939605 | NA | coding | upstream | 66696 | 45455562 ~ 45455616 (-) |
| csrnp2 | LOC106567166 | coding | upstream | 105047 | 45493913 ~ 45505194 (-) |
| LOC110492099 | LOC106567167 | coding | upstream | 117213 | 45506079 ~ 45523249 (-) |
| pou6f1 | LOC106567168 | coding | upstream | 137121 | 45525987 ~ 45536632 (-) |
| LOC110492104 | LOC106567172 | coding | upstream | 159083 | 45547949 ~ 45559553 (-) |
| G1379089 | NA | non-coding | downstream | 151554 | 45236754 ~ 45237000 (-) |
| G1379076 | NA | non-coding | downstream | 160938 | 45227395 ~ 45227616 (-) |
| G1379060 | NA | non-coding | downstream | 175446 | 45212762 ~ 45213108 (-) |
| G1379017 | NA | non-coding | downstream | 206551 | 45181779 ~ 45182003 (-) |
| G1379007 | NA | non-coding | downstream | 210942 | 45177192 ~ 45177612 (-) |
| G1380287 | NA | non-coding | upstream | 13951 | 45402817 ~ 45403068 (-) |
| G1380361 | NA | non-coding | upstream | 156144 | 45545010 ~ 45545226 (-) |
| G1380386 | NA | non-coding | upstream | 215011 | 45603877 ~ 45604864 (-) |
| LOC110492109 | LOC106567177 | non-coding | upstream | 225072 | 45613938 ~ 45627786 (-) |
| G1378530 | NA | other | downstream | 835007 | 44553014 ~ 44553547 (-) |
| G1377482 | NA | other | downstream | 1695716 | 43692320 ~ 43692838 (-) |
| G1376991 | NA | other | downstream | 2049999 | 43337162 ~ 43338555 (-) |
| G1380431 | NA | other | upstream | 316244 | 45705110 ~ 45705453 (-) |
| LOC110492748 | ppdpf | other | upstream | 1027694 | 46416560 ~ 46419996 (-) |
| LOC110492764 | fkb1a | other | upstream | 1209831 | 46598697 ~ 46601691 (-) |
| LOC110492767 | LOC106572444 | other | upstream | 1268601 | 46657459 ~ 46668762 (-) |
