Gene
RNA
| Item | Value |
|---|---|
| gene id | G1380361 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 45545010 ~ 45545226 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: oligosaccharyltransferase complex subunit ostc isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1576768 | True | 217 | lncRNA | 0.38 | 1 | 45545010 | 45545226 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pou6f1 | LOC106567168 | coding | downstream | 8378 | 45525987 ~ 45536632 (-) |
| LOC110492099 | LOC106567167 | coding | downstream | 21761 | 45506079 ~ 45523249 (-) |
| csrnp2 | LOC106567166 | coding | downstream | 39816 | 45493913 ~ 45505194 (-) |
| LOC118939605 | NA | coding | downstream | 89394 | 45455562 ~ 45455616 (-) |
| itga5 | LOC106567163 | coding | downstream | 112206 | 45378265 ~ 45432804 (-) |
| LOC110492104 | LOC106567172 | coding | upstream | 2723 | 45547949 ~ 45559553 (-) |
| racgap1 | racgap1 | coding | upstream | 17243 | 45562469 ~ 45569735 (-) |
| LOC110492109 | LOC106567177 | coding | upstream | 71899 | 45613938 ~ 45627786 (-) |
| LOC110492110 | LOC106567179 | coding | upstream | 107969 | 45653195 ~ 45658491 (-) |
| cd63 | cd63 | coding | upstream | 246433 | 45791659 ~ 45818216 (-) |
| G1380287 | NA | non-coding | downstream | 141942 | 45402817 ~ 45403068 (-) |
| G1380277 | NA | non-coding | downstream | 156144 | 45388554 ~ 45388866 (-) |
| G1379089 | NA | non-coding | downstream | 308010 | 45236754 ~ 45237000 (-) |
| G1379076 | NA | non-coding | downstream | 317394 | 45227395 ~ 45227616 (-) |
| G1380386 | NA | non-coding | upstream | 58651 | 45603877 ~ 45604864 (-) |
| G1380346 | NA | non-coding | upstream | 100568 | 45645794 ~ 45646100 (-) |
| G1380345 | NA | non-coding | upstream | 101125 | 45646351 ~ 45653128 (-) |
| G1380431 | NA | non-coding | upstream | 159884 | 45705110 ~ 45705453 (-) |
| slc48a1a | LOC106567162 | other | downstream | 224632 | 45315947 ~ 45320378 (-) |
| plxna2 | LOC106567158 | other | downstream | 580528 | 44621739 ~ 44964691 (-) |
| G1378530 | NA | other | downstream | 991463 | 44553014 ~ 44553547 (-) |
| G1377482 | NA | other | downstream | 1852172 | 43692320 ~ 43692838 (-) |
| G1376991 | NA | other | downstream | 2206455 | 43337162 ~ 43338555 (-) |
| LOC110492748 | ppdpf | other | upstream | 871334 | 46416560 ~ 46419996 (-) |
| LOC110492764 | fkb1a | other | upstream | 1053471 | 46598697 ~ 46601691 (-) |
| LOC110492767 | LOC106572444 | other | upstream | 1112241 | 46657459 ~ 46668762 (-) |
