Gene
RNA
| Item | Value |
|---|---|
| gene id | G1380346 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 45645794 ~ 45646100 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1576750 | True | 307 | lncRNA | 0.36 | 1 | 45645794 | 45646100 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492109 | LOC106567177 | coding | downstream | 18008 | 45613938 ~ 45627786 (-) |
| racgap1 | racgap1 | coding | downstream | 76059 | 45562469 ~ 45569735 (-) |
| LOC110492104 | LOC106567172 | coding | downstream | 86241 | 45547949 ~ 45559553 (-) |
| pou6f1 | LOC106567168 | coding | downstream | 109162 | 45525987 ~ 45536632 (-) |
| LOC110492099 | LOC106567167 | coding | downstream | 122545 | 45506079 ~ 45523249 (-) |
| LOC110492110 | LOC106567179 | coding | upstream | 7095 | 45653195 ~ 45658491 (-) |
| cd63 | cd63 | coding | upstream | 145559 | 45791659 ~ 45818216 (-) |
| LOC110492119 | LOC106567187 | coding | upstream | 190716 | 45836816 ~ 45842845 (-) |
| LOC110492907 | NA | coding | upstream | 199457 | 45845557 ~ 45847474 (-) |
| LOC110492121 | spats2 | coding | upstream | 239140 | 45885240 ~ 45909573 (-) |
| G1380386 | NA | non-coding | downstream | 40930 | 45603877 ~ 45604864 (-) |
| G1380361 | NA | non-coding | downstream | 100568 | 45545010 ~ 45545226 (-) |
| G1380287 | NA | non-coding | downstream | 242726 | 45402817 ~ 45403068 (-) |
| G1380345 | NA | non-coding | upstream | 251 | 45646351 ~ 45653128 (-) |
| G1380431 | NA | non-coding | upstream | 59010 | 45705110 ~ 45705453 (-) |
| G1380432 | NA | non-coding | upstream | 59938 | 45706038 ~ 45707477 (-) |
| G1380437 | NA | non-coding | upstream | 83949 | 45730049 ~ 45730363 (-) |
| G1380451 | NA | non-coding | upstream | 100666 | 45746766 ~ 45747495 (-) |
| slc48a1a | LOC106567162 | other | downstream | 325416 | 45315947 ~ 45320378 (-) |
| plxna2 | LOC106567158 | other | downstream | 681312 | 44621739 ~ 44964691 (-) |
| G1378530 | NA | other | downstream | 1092247 | 44553014 ~ 44553547 (-) |
| G1377482 | NA | other | downstream | 1952956 | 43692320 ~ 43692838 (-) |
| LOC110492748 | ppdpf | other | upstream | 770460 | 46416560 ~ 46419996 (-) |
| LOC110492764 | fkb1a | other | upstream | 952597 | 46598697 ~ 46601691 (-) |
| LOC110492767 | LOC106572444 | other | upstream | 1011367 | 46657459 ~ 46668762 (-) |
| LOC110491077 | LOC106567232 | other | upstream | 1113187 | 46724969 ~ 46761466 (-) |
