Gene
RNA
| Item | Value |
|---|---|
| gene id | G1380604 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 46041483 ~ 46042583 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1577051 | True | 1033 | lncRNA | 0.46 | 2 | 46041483 | 46042583 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| srxn1 | srxn1 | coding | downstream | 1449 | 46037962 ~ 46040034 (-) |
| tcf15 | LOC106567197 | coding | downstream | 13742 | 46025766 ~ 46027741 (-) |
| LOC118939542 | LOC106567195 | coding | downstream | 28373 | 46007696 ~ 46013110 (-) |
| slc13a3 | slc13a3 | coding | downstream | 49935 | 45978914 ~ 45991548 (-) |
| ocstamp | ocstamp | coding | downstream | 63458 | 45974366 ~ 45978025 (-) |
| scrt2 | scrt2 | coding | upstream | 9116 | 46051699 ~ 46060882 (-) |
| slc52a3 | slc52a3 | coding | upstream | 60532 | 46103115 ~ 46111215 (-) |
| LOC110492133 | LOC105022328 | coding | upstream | 72618 | 46115201 ~ 46122881 (-) |
| peds1 | tm189 | coding | upstream | 87088 | 46129671 ~ 46134746 (-) |
| LOC110492134 | LOC106567201 | coding | upstream | 109014 | 46151597 ~ 46165561 (-) |
| G1380601 | NA | non-coding | downstream | 9432 | 46031824 ~ 46032051 (-) |
| G1380579 | NA | non-coding | downstream | 25716 | 46015521 ~ 46015767 (-) |
| G1380578 | NA | non-coding | downstream | 25979 | 46015263 ~ 46015504 (-) |
| G1380518 | pan2 | non-coding | downstream | 175944 | 45863536 ~ 45865539 (-) |
| G1380605 | NA | non-coding | upstream | 239 | 46042822 ~ 46043182 (-) |
| G1380610 | NA | non-coding | upstream | 7417 | 46050000 ~ 46051668 (-) |
| G1380619 | NA | non-coding | upstream | 32397 | 46074980 ~ 46075184 (-) |
| G1380620 | NA | non-coding | upstream | 33238 | 46075821 ~ 46076036 (-) |
| G1380632 | NA | non-coding | upstream | 50750 | 46093333 ~ 46093549 (-) |
| G1380431 | NA | other | downstream | 336030 | 45705110 ~ 45705453 (-) |
| LOC110492109 | LOC106567177 | other | downstream | 413785 | 45613938 ~ 45627786 (-) |
| slc48a1a | LOC106567162 | other | downstream | 721105 | 45315947 ~ 45320378 (-) |
| plxna2 | LOC106567158 | other | downstream | 1077001 | 44621739 ~ 44964691 (-) |
| G1378530 | NA | other | downstream | 1487936 | 44553014 ~ 44553547 (-) |
| LOC110492748 | ppdpf | other | upstream | 373977 | 46416560 ~ 46419996 (-) |
| LOC110492764 | fkb1a | other | upstream | 556114 | 46598697 ~ 46601691 (-) |
| LOC110492767 | LOC106572444 | other | upstream | 614884 | 46657459 ~ 46668762 (-) |
| LOC110491077 | LOC106567232 | other | upstream | 716704 | 46724969 ~ 46761466 (-) |
| G1381036 | NA | other | upstream | 836028 | 46878611 ~ 46879146 (-) |
