Gene
RNA
| Item | Value |
|---|---|
| gene id | G1380619 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 46074980 ~ 46075184 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1577072 | True | 205 | lncRNA | 0.63 | 1 | 46074980 | 46075184 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| scrt2 | scrt2 | coding | downstream | 14098 | 46051699 ~ 46060882 (-) |
| srxn1 | srxn1 | coding | downstream | 34946 | 46037962 ~ 46040034 (-) |
| tcf15 | LOC106567197 | coding | downstream | 47239 | 46025766 ~ 46027741 (-) |
| LOC118939542 | LOC106567195 | coding | downstream | 61870 | 46007696 ~ 46013110 (-) |
| slc13a3 | slc13a3 | coding | downstream | 83432 | 45978914 ~ 45991548 (-) |
| slc52a3 | slc52a3 | coding | upstream | 27931 | 46103115 ~ 46111215 (-) |
| LOC110492133 | LOC105022328 | coding | upstream | 40017 | 46115201 ~ 46122881 (-) |
| peds1 | tm189 | coding | upstream | 54487 | 46129671 ~ 46134746 (-) |
| LOC110492134 | LOC106567201 | coding | upstream | 76413 | 46151597 ~ 46165561 (-) |
| LOC110492740 | LOC106567210 | coding | upstream | 205144 | 46280328 ~ 46284105 (-) |
| G1380610 | NA | non-coding | downstream | 23312 | 46050000 ~ 46051668 (-) |
| G1380605 | NA | non-coding | downstream | 31798 | 46042822 ~ 46043182 (-) |
| G1380604 | NA | non-coding | downstream | 32397 | 46041483 ~ 46042583 (-) |
| G1380601 | NA | non-coding | downstream | 42929 | 46031824 ~ 46032051 (-) |
| G1380579 | NA | non-coding | downstream | 59213 | 46015521 ~ 46015767 (-) |
| G1380620 | NA | non-coding | upstream | 637 | 46075821 ~ 46076036 (-) |
| G1380632 | NA | non-coding | upstream | 18149 | 46093333 ~ 46093549 (-) |
| G1380634 | NA | non-coding | upstream | 19936 | 46095120 ~ 46095706 (-) |
| G1380636 | NA | non-coding | upstream | 21845 | 46097029 ~ 46097269 (-) |
| G1380637 | NA | non-coding | upstream | 22485 | 46097669 ~ 46098140 (-) |
| G1380431 | NA | other | downstream | 369527 | 45705110 ~ 45705453 (-) |
| LOC110492109 | LOC106567177 | other | downstream | 447282 | 45613938 ~ 45627786 (-) |
| slc48a1a | LOC106567162 | other | downstream | 754602 | 45315947 ~ 45320378 (-) |
| plxna2 | LOC106567158 | other | downstream | 1110498 | 44621739 ~ 44964691 (-) |
| G1378530 | NA | other | downstream | 1521433 | 44553014 ~ 44553547 (-) |
| LOC110492748 | ppdpf | other | upstream | 341376 | 46416560 ~ 46419996 (-) |
| LOC110492764 | fkb1a | other | upstream | 523513 | 46598697 ~ 46601691 (-) |
| LOC110492767 | LOC106572444 | other | upstream | 582283 | 46657459 ~ 46668762 (-) |
| LOC110491077 | LOC106567232 | other | upstream | 684103 | 46724969 ~ 46761466 (-) |
| G1381036 | NA | other | upstream | 803427 | 46878611 ~ 46879146 (-) |
