Gene
RNA
| Item | Value |
|---|---|
| gene id | G1380637 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 46097669 ~ 46098140 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1577090 | True | 472 | lncRNA | 0.43 | 1 | 46097669 | 46098140 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| scrt2 | scrt2 | coding | downstream | 36787 | 46051699 ~ 46060882 (-) |
| srxn1 | srxn1 | coding | downstream | 57635 | 46037962 ~ 46040034 (-) |
| tcf15 | LOC106567197 | coding | downstream | 69928 | 46025766 ~ 46027741 (-) |
| LOC118939542 | LOC106567195 | coding | downstream | 84559 | 46007696 ~ 46013110 (-) |
| slc13a3 | slc13a3 | coding | downstream | 106121 | 45978914 ~ 45991548 (-) |
| slc52a3 | slc52a3 | coding | upstream | 4975 | 46103115 ~ 46111215 (-) |
| LOC110492133 | LOC105022328 | coding | upstream | 17061 | 46115201 ~ 46122881 (-) |
| peds1 | tm189 | coding | upstream | 31531 | 46129671 ~ 46134746 (-) |
| LOC110492134 | LOC106567201 | coding | upstream | 53457 | 46151597 ~ 46165561 (-) |
| LOC110492740 | LOC106567210 | coding | upstream | 182188 | 46280328 ~ 46284105 (-) |
| G1380636 | NA | non-coding | downstream | 400 | 46097029 ~ 46097269 (-) |
| G1380634 | NA | non-coding | downstream | 1963 | 46095120 ~ 46095706 (-) |
| G1380632 | NA | non-coding | downstream | 4120 | 46093333 ~ 46093549 (-) |
| G1380620 | NA | non-coding | downstream | 21633 | 46075821 ~ 46076036 (-) |
| G1380619 | NA | non-coding | downstream | 22485 | 46074980 ~ 46075184 (-) |
| G1380585 | NA | non-coding | upstream | 29254 | 46127394 ~ 46127642 (-) |
| G1380645 | NA | non-coding | upstream | 38460 | 46136600 ~ 46136833 (-) |
| G1380584 | LOC100136165 | non-coding | upstream | 38891 | 46137031 ~ 46138625 (-) |
| G1380646 | NA | non-coding | upstream | 41643 | 46139783 ~ 46140126 (-) |
| G1380647 | NA | non-coding | upstream | 43074 | 46141214 ~ 46142075 (-) |
| G1380431 | NA | other | downstream | 392216 | 45705110 ~ 45705453 (-) |
| LOC110492109 | LOC106567177 | other | downstream | 469971 | 45613938 ~ 45627786 (-) |
| slc48a1a | LOC106567162 | other | downstream | 777291 | 45315947 ~ 45320378 (-) |
| plxna2 | LOC106567158 | other | downstream | 1133187 | 44621739 ~ 44964691 (-) |
| G1378530 | NA | other | downstream | 1544122 | 44553014 ~ 44553547 (-) |
| LOC110492748 | ppdpf | other | upstream | 318420 | 46416560 ~ 46419996 (-) |
| LOC110492764 | fkb1a | other | upstream | 500557 | 46598697 ~ 46601691 (-) |
| LOC110492767 | LOC106572444 | other | upstream | 559327 | 46657459 ~ 46668762 (-) |
| LOC110491077 | LOC106567232 | other | upstream | 661147 | 46724969 ~ 46761466 (-) |
| G1381036 | NA | other | upstream | 780471 | 46878611 ~ 46879146 (-) |
