Gene
RNA
| Item | Value |
|---|---|
| gene id | G1380741 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 46338846 ~ 46339083 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: toll-like receptor 13 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1577200 | True | 238 | lncRNA | 0.60 | 1 | 46338846 | 46339083 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492745 | mare1 | coding | downstream | 1359 | 46330854 ~ 46337487 (-) |
| LOC110492744 | LOC106567213 | coding | downstream | 8220 | 46317844 ~ 46330626 (-) |
| LOC110492742 | LOC106567211 | coding | downstream | 45407 | 46287237 ~ 46293439 (-) |
| LOC110492740 | LOC106567210 | coding | downstream | 54741 | 46280328 ~ 46284105 (-) |
| LOC110492134 | LOC106567201 | coding | downstream | 173285 | 46151597 ~ 46165561 (-) |
| LOC110492746 | LOC106567215 | coding | upstream | 1997 | 46341080 ~ 46371222 (-) |
| LOC110492748 | ppdpf | coding | upstream | 78379 | 46416560 ~ 46419996 (-) |
| LOC110492750 | LOC106567218 | coding | upstream | 84069 | 46423152 ~ 46439814 (-) |
| LOC110492749 | LOC106567344 | coding | upstream | 103840 | 46442923 ~ 46448034 (-) |
| LOC110492754 | LOC106567220 | coding | upstream | 139233 | 46478316 ~ 46486506 (-) |
| G1380722 | NA | non-coding | downstream | 54064 | 46284545 ~ 46284782 (-) |
| G1380721 | LOC100701228 | non-coding | downstream | 61359 | 46277225 ~ 46277487 (-) |
| G1380720 | NA | non-coding | downstream | 61808 | 46276708 ~ 46277038 (-) |
| G1380719 | LOC106567209 | non-coding | downstream | 63912 | 46274086 ~ 46274934 (-) |
| G1380682 | NA | non-coding | downstream | 85707 | 46248735 ~ 46253139 (-) |
| G1380786 | NA | non-coding | upstream | 81084 | 46420167 ~ 46420441 (-) |
| G1380768 | NA | non-coding | upstream | 100977 | 46440060 ~ 46517372 (-) |
| G1380817 | NA | non-coding | upstream | 148067 | 46487150 ~ 46548798 (-) |
| LOC110492758 | LOC106567225 | non-coding | upstream | 185315 | 46524093 ~ 46531221 (-) |
| G1380895 | NA | non-coding | upstream | 263032 | 46602115 ~ 46603005 (-) |
| G1380431 | NA | other | downstream | 633393 | 45705110 ~ 45705453 (-) |
| LOC110492109 | LOC106567177 | other | downstream | 711148 | 45613938 ~ 45627786 (-) |
| slc48a1a | LOC106567162 | other | downstream | 1018468 | 45315947 ~ 45320378 (-) |
| plxna2 | LOC106567158 | other | downstream | 1374364 | 44621739 ~ 44964691 (-) |
| G1378530 | NA | other | downstream | 1785299 | 44553014 ~ 44553547 (-) |
| LOC110492764 | fkb1a | other | upstream | 259614 | 46598697 ~ 46601691 (-) |
| LOC110492767 | LOC106572444 | other | upstream | 318384 | 46657459 ~ 46668762 (-) |
| LOC110491077 | LOC106567232 | other | upstream | 420204 | 46724969 ~ 46761466 (-) |
| G1381036 | NA | other | upstream | 539528 | 46878611 ~ 46879146 (-) |
