Gene
RNA
| Item | Value |
|---|---|
| gene id | G1380786 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 46420167 ~ 46420441 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1577253 | True | 275 | lncRNA | 0.35 | 1 | 46420167 | 46420441 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492748 | ppdpf | coding | downstream | 171 | 46416560 ~ 46419996 (-) |
| LOC110492746 | LOC106567215 | coding | downstream | 48945 | 46341080 ~ 46371222 (-) |
| LOC110492745 | mare1 | coding | downstream | 82680 | 46330854 ~ 46337487 (-) |
| LOC110492744 | LOC106567213 | coding | downstream | 89541 | 46317844 ~ 46330626 (-) |
| LOC110492742 | LOC106567211 | coding | downstream | 126728 | 46287237 ~ 46293439 (-) |
| LOC110492750 | LOC106567218 | coding | upstream | 2711 | 46423152 ~ 46439814 (-) |
| LOC110492749 | LOC106567344 | coding | upstream | 22482 | 46442923 ~ 46448034 (-) |
| LOC110492754 | LOC106567220 | coding | upstream | 57875 | 46478316 ~ 46486506 (-) |
| LOC110492757 | LOC106567223 | coding | upstream | 69634 | 46490075 ~ 46494132 (-) |
| LOC110491073 | LOC106572454 | coding | upstream | 93299 | 46513740 ~ 46518909 (-) |
| G1380741 | NA | non-coding | downstream | 81084 | 46338846 ~ 46339083 (-) |
| G1380722 | NA | non-coding | downstream | 135385 | 46284545 ~ 46284782 (-) |
| G1380721 | LOC100701228 | non-coding | downstream | 142680 | 46277225 ~ 46277487 (-) |
| G1380720 | NA | non-coding | downstream | 143129 | 46276708 ~ 46277038 (-) |
| G1380719 | LOC106567209 | non-coding | downstream | 145233 | 46274086 ~ 46274934 (-) |
| G1380768 | NA | non-coding | upstream | 19619 | 46440060 ~ 46517372 (-) |
| G1380817 | NA | non-coding | upstream | 66709 | 46487150 ~ 46548798 (-) |
| LOC110492758 | LOC106567225 | non-coding | upstream | 103957 | 46524093 ~ 46531221 (-) |
| G1380895 | NA | non-coding | upstream | 181674 | 46602115 ~ 46603005 (-) |
| G1380965 | NA | non-coding | upstream | 355752 | 46776193 ~ 46776427 (-) |
| G1380431 | NA | other | downstream | 714714 | 45705110 ~ 45705453 (-) |
| LOC110492109 | LOC106567177 | other | downstream | 792469 | 45613938 ~ 45627786 (-) |
| slc48a1a | LOC106567162 | other | downstream | 1099789 | 45315947 ~ 45320378 (-) |
| plxna2 | LOC106567158 | other | downstream | 1455685 | 44621739 ~ 44964691 (-) |
| LOC110492764 | fkb1a | other | upstream | 178256 | 46598697 ~ 46601691 (-) |
| LOC110492767 | LOC106572444 | other | upstream | 237026 | 46657459 ~ 46668762 (-) |
| LOC110491077 | LOC106567232 | other | upstream | 338846 | 46724969 ~ 46761466 (-) |
| G1381036 | NA | other | upstream | 458170 | 46878611 ~ 46879146 (-) |
| LOC110492137 | LOC106567248 | other | upstream | 666728 | 47081938 ~ 47089563 (-) |
