Gene
RNA
| Item | Value |
|---|---|
| gene id | G1381036 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 46878611 ~ 46879146 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: vegetative cell wall protein gp1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1577528 | True | 320 | TUCP | 0.54 | 2 | 46878611 | 46879146 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492774 | LOC106567235 | coding | downstream | 82776 | 46777670 ~ 46795835 (-) |
| LOC110492773 | timm17b | coding | downstream | 108062 | 46765870 ~ 46770549 (-) |
| LOC110492770 | LOC106567233 | coding | downstream | 112776 | 46763802 ~ 46765835 (-) |
| LOC110491077 | LOC106567232 | coding | downstream | 117516 | 46724969 ~ 46761466 (-) |
| LOC110492768 | LOC100380661 | coding | downstream | 156011 | 46706224 ~ 46722600 (-) |
| LOC110492777 | LOC106567238 | coding | upstream | 66095 | 46945241 ~ 46974583 (-) |
| LOC110492780 | NA | coding | upstream | 134439 | 47013585 ~ 47015061 (-) |
| LOC110492783 | LOC106567244 | coding | upstream | 150411 | 47029557 ~ 47034701 (-) |
| LOC110492784 | NA | coding | upstream | 161442 | 47040588 ~ 47042845 (-) |
| LOC110492137 | LOC106567248 | coding | upstream | 202792 | 47081938 ~ 47089563 (-) |
| G1381021 | NA | non-coding | downstream | 9655 | 46863497 ~ 46868956 (-) |
| G1381025 | NA | non-coding | downstream | 9899 | 46863725 ~ 46868712 (-) |
| G1380966 | NA | non-coding | downstream | 101661 | 46776714 ~ 46776950 (-) |
| G1380965 | NA | non-coding | downstream | 102184 | 46776193 ~ 46776427 (-) |
| G1380895 | NA | non-coding | downstream | 275606 | 46602115 ~ 46603005 (-) |
| G1380994 | NA | non-coding | upstream | 27488 | 46906634 ~ 46916918 (-) |
| G1380997 | LOC106567312 | non-coding | upstream | 29208 | 46908354 ~ 46909889 (-) |
| G1381022 | NA | non-coding | upstream | 64871 | 46944017 ~ 46944970 (-) |
| G1381100 | NA | non-coding | upstream | 126205 | 47005351 ~ 47010494 (-) |
| LOC110492767 | LOC106572444 | other | downstream | 210017 | 46657459 ~ 46668762 (-) |
| LOC110492764 | fkb1a | other | downstream | 277236 | 46598697 ~ 46601691 (-) |
| LOC110492748 | ppdpf | other | downstream | 458733 | 46416560 ~ 46419996 (-) |
| G1380431 | NA | other | downstream | 1173158 | 45705110 ~ 45705453 (-) |
| LOC110492148 | LOC106567259 | other | upstream | 546166 | 47409235 ~ 47908274 (-) |
| G1382721 | NA | other | upstream | 1064233 | 47943379 ~ 47946222 (-) |
| G1382894 | mitf | other | upstream | 1403067 | 48282213 ~ 48312958 (-) |
| LOC110492187 | LOC106936674 | other | upstream | 2305162 | 49179653 ~ 49196706 (-) |
