Gene
RNA
| Item | Value |
|---|---|
| gene id | G1381112 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 47044613 ~ 47044824 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1577623 | True | 212 | lncRNA | 0.48 | 1 | 47044613 | 47044824 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492784 | NA | coding | downstream | 1768 | 47040588 ~ 47042845 (-) |
| LOC110492783 | LOC106567244 | coding | downstream | 9912 | 47029557 ~ 47034701 (-) |
| LOC110492780 | NA | coding | downstream | 29552 | 47013585 ~ 47015061 (-) |
| LOC110492777 | LOC106567238 | coding | downstream | 70030 | 46945241 ~ 46974583 (-) |
| LOC110492774 | LOC106567235 | coding | downstream | 248778 | 46777670 ~ 46795835 (-) |
| LOC110492137 | LOC106567248 | coding | upstream | 37114 | 47081938 ~ 47089563 (-) |
| LOC110492139 | s38a3 | coding | upstream | 44978 | 47089802 ~ 47103227 (-) |
| LOC110492147 | LOC106572391 | coding | upstream | 321408 | 47366232 ~ 47390987 (-) |
| LOC110492148 | LOC106567259 | coding | upstream | 364411 | 47409235 ~ 47908274 (-) |
| thap3 | LOC106567262 | coding | upstream | 873333 | 47918157 ~ 47927478 (-) |
| G1381106 | NA | non-coding | downstream | 19274 | 47025081 ~ 47025339 (-) |
| G1381100 | NA | non-coding | downstream | 34119 | 47005351 ~ 47010494 (-) |
| G1381022 | NA | non-coding | downstream | 99643 | 46944017 ~ 46944970 (-) |
| G1381123 | NA | non-coding | upstream | 14019 | 47058843 ~ 47060965 (-) |
| G1381233 | NA | non-coding | upstream | 167190 | 47212014 ~ 47212221 (-) |
| G1381236 | NA | non-coding | upstream | 170563 | 47215387 ~ 47215591 (-) |
| G1381241 | NA | non-coding | upstream | 177287 | 47222111 ~ 47222320 (-) |
| G1381036 | NA | other | downstream | 165467 | 46878611 ~ 46879146 (-) |
| LOC110491077 | LOC106567232 | other | downstream | 283147 | 46724969 ~ 46761466 (-) |
| LOC110492767 | LOC106572444 | other | downstream | 376019 | 46657459 ~ 46668762 (-) |
| LOC110492764 | fkb1a | other | downstream | 443238 | 46598697 ~ 46601691 (-) |
| LOC110492748 | ppdpf | other | downstream | 624735 | 46416560 ~ 46419996 (-) |
| G1382721 | NA | other | upstream | 898555 | 47943379 ~ 47946222 (-) |
| G1382894 | mitf | other | upstream | 1237389 | 48282213 ~ 48312958 (-) |
| LOC110492187 | LOC106936674 | other | upstream | 2139484 | 49179653 ~ 49196706 (-) |
