Gene
RNA
| Item | Value |
|---|---|
| gene id | G1381247 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 47252300 ~ 47252514 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1577779 | True | 215 | lncRNA | 0.56 | 1 | 47252300 | 47252514 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492139 | s38a3 | coding | downstream | 149073 | 47089802 ~ 47103227 (-) |
| LOC110492137 | LOC106567248 | coding | downstream | 162737 | 47081938 ~ 47089563 (-) |
| LOC110492784 | NA | coding | downstream | 209455 | 47040588 ~ 47042845 (-) |
| LOC110492783 | LOC106567244 | coding | downstream | 217599 | 47029557 ~ 47034701 (-) |
| LOC110492780 | NA | coding | downstream | 237239 | 47013585 ~ 47015061 (-) |
| LOC110492147 | LOC106572391 | coding | upstream | 113718 | 47366232 ~ 47390987 (-) |
| LOC110492148 | LOC106567259 | coding | upstream | 156721 | 47409235 ~ 47908274 (-) |
| thap3 | LOC106567262 | coding | upstream | 665643 | 47918157 ~ 47927478 (-) |
| LOC110492153 | LOC106567263 | coding | upstream | 700904 | 47953418 ~ 47956955 (-) |
| LOC118939549 | LOC106567267 | coding | upstream | 779388 | 48031902 ~ 48036060 (-) |
| G1381245 | NA | non-coding | downstream | 4811 | 47247155 ~ 47247489 (-) |
| G1381241 | NA | non-coding | downstream | 29980 | 47222111 ~ 47222320 (-) |
| G1381236 | NA | non-coding | downstream | 36709 | 47215387 ~ 47215591 (-) |
| G1381233 | NA | non-coding | downstream | 40079 | 47212014 ~ 47212221 (-) |
| G1381309 | NA | non-coding | upstream | 100542 | 47353056 ~ 47353276 (-) |
| G1381365 | NA | non-coding | upstream | 153192 | 47405706 ~ 47408072 (-) |
| G1382454 | NA | non-coding | upstream | 186936 | 47439450 ~ 47440540 (-) |
| G1382475 | NA | non-coding | upstream | 238546 | 47491060 ~ 47491567 (-) |
| G1381036 | NA | other | downstream | 373154 | 46878611 ~ 46879146 (-) |
| LOC110491077 | LOC106567232 | other | downstream | 490834 | 46724969 ~ 46761466 (-) |
| LOC110492767 | LOC106572444 | other | downstream | 583706 | 46657459 ~ 46668762 (-) |
| LOC110492764 | fkb1a | other | downstream | 650925 | 46598697 ~ 46601691 (-) |
| G1382721 | NA | other | upstream | 690865 | 47943379 ~ 47946222 (-) |
| G1382894 | mitf | other | upstream | 1029699 | 48282213 ~ 48312958 (-) |
| LOC110492187 | LOC106936674 | other | upstream | 1931794 | 49179653 ~ 49196706 (-) |
| LOC110491086 | LOC106566907 | other | upstream | 2350604 | 49576512 ~ 49719539 (-) |
