Gene
RNA
| Item | Value |
|---|---|
| gene id | G1382535 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 47605268 ~ 47606425 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1579166 | True | 410 | lncRNA | 0.46 | 3 | 47605268 | 47606425 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492147 | LOC106572391 | coding | downstream | 214281 | 47366232 ~ 47390987 (-) |
| LOC110492139 | s38a3 | coding | downstream | 502041 | 47089802 ~ 47103227 (-) |
| LOC110492137 | LOC106567248 | coding | downstream | 515705 | 47081938 ~ 47089563 (-) |
| LOC110492784 | NA | coding | downstream | 562423 | 47040588 ~ 47042845 (-) |
| LOC110492783 | LOC106567244 | coding | downstream | 570567 | 47029557 ~ 47034701 (-) |
| thap3 | LOC106567262 | coding | upstream | 311732 | 47918157 ~ 47927478 (-) |
| LOC110492153 | LOC106567263 | coding | upstream | 346993 | 47953418 ~ 47956955 (-) |
| LOC118939549 | LOC106567267 | coding | upstream | 425477 | 48031902 ~ 48036060 (-) |
| LOC118939550 | LOC106567268 | coding | upstream | 435608 | 48042033 ~ 48074973 (-) |
| LOC118939551 | LOC106567269 | coding | upstream | 470079 | 48076504 ~ 48087589 (-) |
| G1382475 | NA | non-coding | downstream | 113701 | 47491060 ~ 47491567 (-) |
| G1382454 | NA | non-coding | downstream | 164728 | 47439450 ~ 47440540 (-) |
| LOC110492148 | LOC106567259 | non-coding | downstream | 183225 | 47409235 ~ 47908274 (-) |
| G1381365 | NA | non-coding | downstream | 197196 | 47405706 ~ 47408072 (-) |
| G1381309 | NA | non-coding | downstream | 251992 | 47353056 ~ 47353276 (-) |
| G1382724 | LOC106577040 | non-coding | upstream | 318259 | 47924684 ~ 47924920 (-) |
| G1382743 | NA | non-coding | upstream | 367723 | 47974148 ~ 47974435 (-) |
| G1382745 | NA | non-coding | upstream | 375116 | 47981541 ~ 47981742 (-) |
| G1382767 | LOC106567266 | non-coding | upstream | 415688 | 48022113 ~ 48023047 (-) |
| G1381036 | NA | other | downstream | 726122 | 46878611 ~ 46879146 (-) |
| LOC110491077 | LOC106567232 | other | downstream | 843802 | 46724969 ~ 46761466 (-) |
| LOC110492767 | LOC106572444 | other | downstream | 936674 | 46657459 ~ 46668762 (-) |
| G1382721 | NA | other | upstream | 336954 | 47943379 ~ 47946222 (-) |
| G1382894 | mitf | other | upstream | 675788 | 48282213 ~ 48312958 (-) |
| LOC110492187 | LOC106936674 | other | upstream | 1577883 | 49179653 ~ 49196706 (-) |
| LOC110491086 | LOC106566907 | other | upstream | 1996693 | 49576512 ~ 49719539 (-) |
| G1384875 | NA | other | upstream | 2458396 | 50064821 ~ 50065817 (-) |
