XLOC_032859


Basic Information

Item Value
gene id XLOC_032859
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 24217928 ~ 24219177 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064744
ATGCACATAAACAACCGAAATGTAATATGTGTCTTTCAACACTATGGGGCTCTAGGTTCTTGcagcttaaaaaaaatgtacctgATAGTGGAGTTCATTCACGAAGGGAGTACCGGACCTGTCGCAAAGTCTTGGTACTCAGAGGGTCACTCGTGGTGGCCTCCATACAAGGAGATAGACAGGGTGTTGAAGAGTGTCCGGTTGATGGAGGCACCACAACCAGATAAAGGTTGGACCAAGCATCAGGCCAGAATTCTACACGAGTCAGCATCTTTTGACAAGATTTCAAAGAAATGGAAACAGGCATGCTACACATCTGACATCTCGGAATCTGAAATGCCTGCAAAAAGAATTCCGAAAAAGAAAATATACACATCAGATGATGAGCCTTGCGATACTCcccacaaaaaaaagaaactaaataaagaaaaaagtctaCCAACACCAAGGGTCCCACCTGCACCAAAAGCTCCAACACCCCCAAGACATATCAGGGCAAAAGGTAAAAATACACCACTTATATTACTGCCAGTCAAAAGTGTATGTATGATCACTgagcagtttttttctttttcaggtccCCTTGTACGACCTCAGCTAacatcatgtaaaacaattaacagTTTTTGCAATTGTAAGTTTTAATTAGTAAAACAGATATTTGATGTTTTAAGTACTTTGTGATATGCTCA

Function

GO:

id name namespace
GO:0001764 neuron migration biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064744 True 692 lncRNA 0.40 3 24217928 24219177

Neighbor

gene id symbol gene type direction distance location
XLOC_032858 si:ch73-389b16.2 coding downstream 13948 24152816 ~ 24203980 (-)
XLOC_032857 si:ch73-389b16.1 coding downstream 74005 24140757 ~ 24143923 (-)
XLOC_032856 scinla coding downstream 114262 24090950 ~ 24103666 (-)
XLOC_032855 RDH8 coding downstream 130649 24076954 ~ 24087279 (-)
XLOC_032854 dr1 coding downstream 151252 24055421 ~ 24066676 (-)
XLOC_032860 BX927081.1 coding upstream 76862 24296039 ~ 24301324 (-)
XLOC_032861 si:dkeyp-85h7.1 coding upstream 98854 24318031 ~ 24320268 (-)
XLOC_032862 ephx4 coding upstream 110098 24329275 ~ 24358732 (-)
XLOC_032863 brdt coding upstream 145501 24364678 ~ 24392915 (-)
XLOC_032864 BX004768.2 coding upstream 566650 24785827 ~ 24785943 (-)
XLOC_032850 NA non-coding downstream 796190 23420169 ~ 23421738 (-)
XLOC_032849 CR376761.1 non-coding downstream 823029 23394843 ~ 23394899 (-)
XLOC_032848 NA non-coding downstream 1003134 23210551 ~ 23214794 (-)
XLOC_032846 NA non-coding downstream 1199448 23018053 ~ 23018480 (-)
XLOC_032844 BX537277.1 non-coding downstream 1676852 22540982 ~ 22541076 (-)
XLOC_032865 BX005463.1 non-coding upstream 622993 24842170 ~ 24842286 (-)
XLOC_032866 NA non-coding upstream 630916 24850093 ~ 24869146 (-)
XLOC_032870 CR790380.1 non-coding upstream 968846 25188023 ~ 25188783 (-)
XLOC_032872 NA non-coding upstream 1048774 25267951 ~ 25268308 (-)

Expression


Co-expression Network