Gene
RNA
| Item | Value |
|---|---|
| gene id | G1382873 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 48213704 ~ 48214110 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1579527 | True | 407 | lncRNA | 0.32 | 1 | 48213704 | 48214110 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939552 | NA | coding | downstream | 1484 | 48208293 ~ 48212220 (-) |
| LOC110491083 | fam19a4 | coding | downstream | 17007 | 48184977 ~ 48196697 (-) |
| LOC110492156 | LOC106567270 | coding | downstream | 119764 | 48089427 ~ 48093940 (-) |
| LOC118939551 | LOC106567269 | coding | downstream | 126115 | 48076504 ~ 48087589 (-) |
| LOC118939550 | LOC106567268 | coding | downstream | 138731 | 48042033 ~ 48074973 (-) |
| LOC110492159 | uba3 | coding | upstream | 6648 | 48220758 ~ 48230211 (-) |
| LOC110492161 | lmod3 | coding | upstream | 20880 | 48232398 ~ 48241496 (-) |
| LOC110492160 | frmd4b | coding | upstream | 27948 | 48242058 ~ 48272289 (-) |
| LOC110492165 | LOC106567279 | coding | upstream | 119810 | 48333920 ~ 48343017 (-) |
| LOC110492167 | NA | coding | upstream | 129022 | 48343132 ~ 48347885 (-) |
| G1382872 | NA | non-coding | downstream | 70 | 48213334 ~ 48213634 (-) |
| G1382841 | NA | non-coding | downstream | 29487 | 48183023 ~ 48184217 (-) |
| G1382840 | NA | non-coding | downstream | 31063 | 48181005 ~ 48182641 (-) |
| G1382803 | NA | non-coding | downstream | 84478 | 48129004 ~ 48129226 (-) |
| G1382875 | NA | non-coding | upstream | 3710 | 48217820 ~ 48218040 (-) |
| G1382876 | NA | non-coding | upstream | 8467 | 48222577 ~ 48223011 (-) |
| G1382933 | mitf | non-coding | upstream | 109709 | 48323819 ~ 48324138 (-) |
| G1382935 | NA | non-coding | upstream | 111952 | 48326062 ~ 48326372 (-) |
| G1382721 | NA | other | downstream | 267482 | 47943379 ~ 47946222 (-) |
| LOC110492148 | LOC106567259 | other | downstream | 764839 | 47409235 ~ 47908274 (-) |
| LOC110492137 | LOC106567248 | other | downstream | 1124174 | 47081938 ~ 47089563 (-) |
| G1381036 | NA | other | downstream | 1334558 | 46878611 ~ 46879146 (-) |
| LOC110491077 | LOC106567232 | other | downstream | 1452238 | 46724969 ~ 46761466 (-) |
| G1382894 | mitf | other | upstream | 68103 | 48282213 ~ 48312958 (-) |
| LOC110492187 | LOC106936674 | other | upstream | 970198 | 49179653 ~ 49196706 (-) |
| LOC110491086 | LOC106566907 | other | upstream | 1389008 | 49576512 ~ 49719539 (-) |
| G1384875 | NA | other | upstream | 1850711 | 50064821 ~ 50065817 (-) |
| G1385645 | NA | other | upstream | 2841521 | 51055631 ~ 51056061 (-) |
