Gene
RNA
| Item | Value |
|---|---|
| gene id | G1382875 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 48217820 ~ 48218040 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1579529 | True | 221 | lncRNA | 0.33 | 1 | 48217820 | 48218040 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939552 | NA | coding | downstream | 5600 | 48208293 ~ 48212220 (-) |
| LOC110491083 | fam19a4 | coding | downstream | 21123 | 48184977 ~ 48196697 (-) |
| LOC110492156 | LOC106567270 | coding | downstream | 123880 | 48089427 ~ 48093940 (-) |
| LOC118939551 | LOC106567269 | coding | downstream | 130231 | 48076504 ~ 48087589 (-) |
| LOC118939550 | LOC106567268 | coding | downstream | 142847 | 48042033 ~ 48074973 (-) |
| LOC110492159 | uba3 | coding | upstream | 2718 | 48220758 ~ 48230211 (-) |
| LOC110492161 | lmod3 | coding | upstream | 16950 | 48232398 ~ 48241496 (-) |
| LOC110492160 | frmd4b | coding | upstream | 24018 | 48242058 ~ 48272289 (-) |
| LOC110492165 | LOC106567279 | coding | upstream | 115880 | 48333920 ~ 48343017 (-) |
| LOC110492167 | NA | coding | upstream | 125092 | 48343132 ~ 48347885 (-) |
| G1382873 | NA | non-coding | downstream | 3710 | 48213704 ~ 48214110 (-) |
| G1382872 | NA | non-coding | downstream | 4186 | 48213334 ~ 48213634 (-) |
| G1382841 | NA | non-coding | downstream | 33603 | 48183023 ~ 48184217 (-) |
| G1382840 | NA | non-coding | downstream | 35179 | 48181005 ~ 48182641 (-) |
| G1382876 | NA | non-coding | upstream | 4537 | 48222577 ~ 48223011 (-) |
| G1382933 | mitf | non-coding | upstream | 105779 | 48323819 ~ 48324138 (-) |
| G1382935 | NA | non-coding | upstream | 108022 | 48326062 ~ 48326372 (-) |
| G1382937 | NA | non-coding | upstream | 109137 | 48327177 ~ 48327582 (-) |
| G1382721 | NA | other | downstream | 271598 | 47943379 ~ 47946222 (-) |
| LOC110492148 | LOC106567259 | other | downstream | 768955 | 47409235 ~ 47908274 (-) |
| LOC110492137 | LOC106567248 | other | downstream | 1128290 | 47081938 ~ 47089563 (-) |
| G1381036 | NA | other | downstream | 1338674 | 46878611 ~ 46879146 (-) |
| LOC110491077 | LOC106567232 | other | downstream | 1456354 | 46724969 ~ 46761466 (-) |
| G1382894 | mitf | other | upstream | 64173 | 48282213 ~ 48312958 (-) |
| LOC110492187 | LOC106936674 | other | upstream | 966268 | 49179653 ~ 49196706 (-) |
| LOC110491086 | LOC106566907 | other | upstream | 1385078 | 49576512 ~ 49719539 (-) |
| G1384875 | NA | other | upstream | 1846781 | 50064821 ~ 50065817 (-) |
| G1385645 | NA | other | upstream | 2837591 | 51055631 ~ 51056061 (-) |
