Gene
RNA
| Item | Value |
|---|---|
| gene id | G1383394 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 49061454 ~ 49061684 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ZK1236.4, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1580111 | True | 231 | lncRNA | 0.56 | 1 | 49061454 | 49061684 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492178 | LOC106567289 | coding | downstream | 13936 | 49043771 ~ 49047518 (-) |
| LOC110492180 | LOC105022745 | coding | downstream | 21273 | 49034329 ~ 49040181 (-) |
| LOC110492177 | LOC106567287 | coding | downstream | 90966 | 48650173 ~ 48970488 (-) |
| LOC110491085 | NA | coding | downstream | 513287 | 48547180 ~ 48548167 (-) |
| LOC110492176 | LOC106567286 | coding | downstream | 528278 | 48525042 ~ 48533176 (-) |
| LOC110492190 | LOC106567293 | coding | upstream | 14883 | 49076567 ~ 49082834 (-) |
| LOC110492186 | LOC106566918 | coding | upstream | 85133 | 49146817 ~ 49159851 (-) |
| LOC110492187 | LOC106936674 | coding | upstream | 117969 | 49179653 ~ 49196706 (-) |
| LOC110492191 | NA | coding | upstream | 196353 | 49258037 ~ 49259636 (-) |
| LOC110492195 | LOC106566910 | coding | upstream | 347444 | 49409128 ~ 49517268 (-) |
| G1383391 | NA | non-coding | downstream | 2224 | 49058848 ~ 49059230 (-) |
| G1383073 | NA | non-coding | downstream | 447106 | 48596478 ~ 48614348 (-) |
| G1382997 | NA | non-coding | downstream | 613571 | 48447219 ~ 48447883 (-) |
| G1382925 | LOC106567283 | non-coding | downstream | 668208 | 48390979 ~ 48393246 (-) |
| G1383396 | NA | non-coding | upstream | 2518 | 49064202 ~ 49065411 (-) |
| G1383437 | NA | non-coding | upstream | 80731 | 49142415 ~ 49146676 (-) |
| G1383505 | NA | non-coding | upstream | 189447 | 49251131 ~ 49251635 (-) |
| G1383506 | NA | non-coding | upstream | 190012 | 49251696 ~ 49251939 (-) |
| G1382894 | mitf | other | downstream | 748496 | 48282213 ~ 48312958 (-) |
| G1382721 | NA | other | downstream | 1115232 | 47943379 ~ 47946222 (-) |
| LOC110492148 | LOC106567259 | other | downstream | 1612589 | 47409235 ~ 47908274 (-) |
| LOC110492137 | LOC106567248 | other | downstream | 1971924 | 47081938 ~ 47089563 (-) |
| G1381036 | NA | other | downstream | 2182308 | 46878611 ~ 46879146 (-) |
| LOC110491086 | LOC106566907 | other | upstream | 541434 | 49576512 ~ 49719539 (-) |
| G1384875 | NA | other | upstream | 1003137 | 50064821 ~ 50065817 (-) |
| G1385645 | NA | other | upstream | 1993947 | 51055631 ~ 51056061 (-) |
| G1385888 | NA | other | upstream | 2028961 | 51090645 ~ 51128648 (-) |
