Gene
RNA
| Item | Value |
|---|---|
| gene id | G1384420 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 49303471 ~ 49305133 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1581274 | False | 390 | lncRNA | 0.36 | 3 | 49303471 | 49304040 |
| TU1581275 | True | 253 | lncRNA | 0.39 | 2 | 49303471 | 49305133 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492191 | NA | coding | downstream | 43835 | 49258037 ~ 49259636 (-) |
| LOC110492187 | LOC106936674 | coding | downstream | 106765 | 49179653 ~ 49196706 (-) |
| LOC110492186 | LOC106566918 | coding | downstream | 143620 | 49146817 ~ 49159851 (-) |
| LOC110492190 | LOC106567293 | coding | downstream | 220637 | 49076567 ~ 49082834 (-) |
| LOC110492178 | LOC106567289 | coding | downstream | 255953 | 49043771 ~ 49047518 (-) |
| LOC110492195 | LOC106566910 | coding | upstream | 103995 | 49409128 ~ 49517268 (-) |
| si:ch73-217n20.1 | LOC106566909 | coding | upstream | 229747 | 49534880 ~ 49543357 (-) |
| pfkfb2a | LOC106566908 | coding | upstream | 248027 | 49553160 ~ 49570716 (-) |
| LOC110491086 | LOC106566907 | coding | upstream | 271379 | 49576512 ~ 49719539 (-) |
| LOC110492200 | rprd1b | coding | upstream | 480514 | 49785647 ~ 49789953 (-) |
| G1384397 | NA | non-coding | downstream | 24973 | 49277989 ~ 49278498 (-) |
| G1383506 | NA | non-coding | downstream | 51532 | 49251696 ~ 49251939 (-) |
| G1383505 | NA | non-coding | downstream | 51836 | 49251131 ~ 49251635 (-) |
| G1383437 | NA | non-coding | downstream | 156795 | 49142415 ~ 49146676 (-) |
| G1384400 | NA | non-coding | upstream | 78902 | 49384035 ~ 49390274 (-) |
| G1384554 | NA | non-coding | upstream | 251363 | 49556496 ~ 49557490 (-) |
| G1384695 | NA | non-coding | upstream | 463428 | 49768561 ~ 49768975 (-) |
| G1384703 | LOC106566904 | non-coding | upstream | 468870 | 49774003 ~ 49775982 (-) |
| G1382894 | mitf | other | downstream | 990513 | 48282213 ~ 48312958 (-) |
| G1382721 | NA | other | downstream | 1357249 | 47943379 ~ 47946222 (-) |
| LOC110492148 | LOC106567259 | other | downstream | 1854606 | 47409235 ~ 47908274 (-) |
| LOC110492137 | LOC106567248 | other | downstream | 2213941 | 47081938 ~ 47089563 (-) |
| G1384875 | NA | other | upstream | 759688 | 50064821 ~ 50065817 (-) |
| G1385645 | NA | other | upstream | 1750498 | 51055631 ~ 51056061 (-) |
| G1385888 | NA | other | upstream | 1785512 | 51090645 ~ 51128648 (-) |
| dffb | LOC106566885 | other | upstream | 1808270 | 51113403 ~ 51117850 (-) |
