G1384703 (LOC106566904)


Basic Information

Item Value
gene id G1384703
gene name LOC106566904
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 49774003 ~ 49775982 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1581572
CTTTTGCAGGCTCTGAGGAGCAGCCAGCACGGGTGGTttgggagagatggagggcttcTTCCTGATGGTAGCAGGTGAGCTGTTCTTTCTGAGGCTGGGTGCTGCTGTTCTCTGGCTGACATGGGACTGGGAACTCTGGGACGTGACAGATGACgagtcctccatctctccaccaatAGCAAAGAGGCAGCTGCGTTCCGAGCTTATGAACACACTGGTACTCTCACCTGACGAATCTGTGCAGCTGAGATGAAGGTTTTGTTTCTGGTGATTATGATGATTACTTAGGTCCTCTTCAGTCACAGTCGCCGGGAAAGAATGAACAATATGACTGGCCTCCCCACCTTGTGTCTGGTTGCCAGGGTAACCAACCGGAGGTAAAGAACCTCGcccagaggaggaagatgagtggCTGCAGGAGGTAGAGGCACTACTGCCTGAACCAATGGAGTTGGGCCGGAGATATTCAATATCTGTTTGTAGACAAGACGGCA

Function

NR:

description
uncharacterized protein KIAA1755-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1581572 True 494 lncRNA 0.52 2 49774003 49775982

Neighbor

gene id symbol gene type direction distance location
LOC110491086 LOC106566907 coding downstream 170563 49576512 ~ 49719539 (-)
pfkfb2a LOC106566908 coding downstream 203287 49553160 ~ 49570716 (-)
si:ch73-217n20.1 LOC106566909 coding downstream 230646 49534880 ~ 49543357 (-)
LOC110492195 LOC106566910 coding downstream 256735 49409128 ~ 49517268 (-)
LOC110492191 NA coding downstream 514367 49258037 ~ 49259636 (-)
LOC110492200 rprd1b coding upstream 9665 49785647 ~ 49789953 (-)
LOC110492201 LOC106566903 coding upstream 26001 49801983 ~ 49833165 (-)
LOC110492202 LOC106566902 coding upstream 64116 49840098 ~ 49880822 (-)
LOC110491088 LOC106566900 coding upstream 151482 49927464 ~ 49933750 (-)
e2f1 LOC106566901 coding upstream 157097 49933079 ~ 49938888 (-)
G1384695 NA non-coding downstream 5028 49768561 ~ 49768975 (-)
G1384554 NA non-coding downstream 216513 49556496 ~ 49557490 (-)
G1384400 NA non-coding downstream 383729 49384035 ~ 49390274 (-)
G1384420 NA non-coding downstream 468870 49303471 ~ 49305133 (-)
G1384896 NA non-coding upstream 322020 50098002 ~ 50103021 (-)
G1384934 NA non-coding upstream 433326 50209308 ~ 50210181 (-)
G1384933 NA non-coding upstream 435519 50211501 ~ 50215831 (-)
G1384994 NA non-coding upstream 440127 50216109 ~ 50216338 (-)
G1384997 NA non-coding upstream 445693 50221675 ~ 50221904 (-)
LOC110492187 LOC106936674 other downstream 577677 49179653 ~ 49196706 (-)
G1382894 mitf other downstream 1461045 48282213 ~ 48312958 (-)
G1382721 NA other downstream 1827781 47943379 ~ 47946222 (-)
LOC110492148 LOC106567259 other downstream 2325138 47409235 ~ 47908274 (-)
G1384875 NA other upstream 288839 50064821 ~ 50065817 (-)
G1385645 NA other upstream 1279649 51055631 ~ 51056061 (-)
G1385888 NA other upstream 1314663 51090645 ~ 51128648 (-)
dffb LOC106566885 other upstream 1337421 51113403 ~ 51117850 (-)
LOC110492226 LOC106572002 other upstream 2207152 51978399 ~ 51990025 (-)

Expression


Co-expression Network