Gene
RNA
| Item | Value |
|---|---|
| gene id | G1384934 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50209308 ~ 50210181 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1581833 | True | 874 | lncRNA | 0.43 | 1 | 50209308 | 50210181 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| itchb | LOC106566898 | coding | downstream | 238015 | 49950665 ~ 49971293 (-) |
| e2f1 | LOC106566901 | coding | downstream | 270420 | 49933079 ~ 49938888 (-) |
| LOC110491088 | LOC106566900 | coding | downstream | 275558 | 49927464 ~ 49933750 (-) |
| LOC110492202 | LOC106566902 | coding | downstream | 328486 | 49840098 ~ 49880822 (-) |
| LOC110492201 | LOC106566903 | coding | downstream | 376143 | 49801983 ~ 49833165 (-) |
| LOC110492208 | LOC106566894 | coding | upstream | 104735 | 50314916 ~ 50318773 (-) |
| mad2l2 | mad2l2 | coding | upstream | 811275 | 51021456 ~ 51031919 (-) |
| LOC110491089 | lrrc47 | coding | upstream | 830942 | 51041123 ~ 51043794 (-) |
| LOC110491090 | fam57b | coding | upstream | 866597 | 51076778 ~ 51077359 (-) |
| LOC110492214 | LOC106566770 | coding | upstream | 891602 | 51101783 ~ 51103933 (-) |
| G1384896 | NA | non-coding | downstream | 106287 | 50098002 ~ 50103021 (-) |
| G1384703 | LOC106566904 | non-coding | downstream | 433326 | 49774003 ~ 49775982 (-) |
| G1384695 | NA | non-coding | downstream | 440333 | 49768561 ~ 49768975 (-) |
| G1384554 | NA | non-coding | downstream | 651818 | 49556496 ~ 49557490 (-) |
| LOC110492195 | LOC106566910 | non-coding | downstream | 798625 | 49409128 ~ 49517268 (-) |
| G1384933 | NA | non-coding | upstream | 1320 | 50211501 ~ 50215831 (-) |
| G1384994 | NA | non-coding | upstream | 5928 | 50216109 ~ 50216338 (-) |
| G1384997 | NA | non-coding | upstream | 11494 | 50221675 ~ 50221904 (-) |
| G1385003 | NA | non-coding | upstream | 21253 | 50231434 ~ 50231638 (-) |
| G1385009 | NA | non-coding | upstream | 31690 | 50241871 ~ 50242357 (-) |
| G1384875 | NA | other | downstream | 143491 | 50064821 ~ 50065817 (-) |
| LOC110491086 | LOC106566907 | other | downstream | 489769 | 49576512 ~ 49719539 (-) |
| LOC110492187 | LOC106936674 | other | downstream | 1012982 | 49179653 ~ 49196706 (-) |
| G1382894 | mitf | other | downstream | 1896350 | 48282213 ~ 48312958 (-) |
| G1382721 | NA | other | downstream | 2263086 | 47943379 ~ 47946222 (-) |
| G1385645 | NA | other | upstream | 845450 | 51055631 ~ 51056061 (-) |
| G1385888 | NA | other | upstream | 880464 | 51090645 ~ 51128648 (-) |
| dffb | LOC106566885 | other | upstream | 903222 | 51113403 ~ 51117850 (-) |
| LOC110492226 | LOC106572002 | other | upstream | 1772953 | 51978399 ~ 51990025 (-) |
| spen | LOC106566857 | other | upstream | 2208695 | 52379551 ~ 52428869 (-) |
