Gene
RNA
| Item | Value |
|---|---|
| gene id | G1384063 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50252012 ~ 50252362 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1580856 | True | 351 | lncRNA | 0.38 | 1 | 50252012 | 50252362 |
50,249,200
50,249,600
50,250,000
50,250,400
50,250,800
50,251,200
50,251,600
50,251,600
50,252,000
50,252,400
50,252,800
50,253,200
50,253,600
50,254,000
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136219 | LOC106566896 | coding | upstream | 42815 | 50121066 ~ 50210247 (+) |
| LOC110492206 | LOC106566897 | coding | upstream | 236489 | 49996722 ~ 50015523 (+) |
| znf341 | LOC106566899 | coding | upstream | 300960 | 49939245 ~ 49951052 (+) |
| tti1 | tti1 | coding | upstream | 453995 | 49789953 ~ 49798017 (+) |
| tgm2a | LOC106566906 | coding | upstream | 465701 | 49778654 ~ 49786311 (+) |
| LOC110492209 | LOC106566893 | coding | downstream | 71783 | 50324145 ~ 50326821 (+) |
| LOC110492210 | LOC106566890 | coding | downstream | 237875 | 50490237 ~ 50796195 (+) |
| LOC110492909 | NA | coding | downstream | 686362 | 50938724 ~ 50939714 (+) |
| LOC118939554 | NA | coding | downstream | 835739 | 51088101 ~ 51094492 (+) |
| c16h1orf174 | LOC106566886 | coding | downstream | 857746 | 51110108 ~ 51113467 (+) |
| G1384061 | NA | non-coding | upstream | 1097 | 50249583 ~ 50250915 (+) |
| G1384055 | NA | non-coding | upstream | 11419 | 50240362 ~ 50240593 (+) |
| G1384050 | NA | non-coding | upstream | 20383 | 50231405 ~ 50231629 (+) |
| G1384045 | NA | non-coding | upstream | 28752 | 50223043 ~ 50223260 (+) |
| G1384043 | NA | non-coding | upstream | 30256 | 50221384 ~ 50221756 (+) |
| G1384076 | NA | non-coding | downstream | 42535 | 50294897 ~ 50295441 (+) |
| G1384058 | NA | non-coding | downstream | 61435 | 50313797 ~ 50314363 (+) |
| G1384086 | NA | non-coding | downstream | 76993 | 50329355 ~ 50329678 (+) |
| G1384092 | NA | non-coding | downstream | 83492 | 50335854 ~ 50336083 (+) |
| G1384093 | NA | non-coding | downstream | 84273 | 50336635 ~ 50336933 (+) |
| LOC110492182 | LOC106566913 | other | upstream | 1002137 | 49202107 ~ 49258042 (+) |
| LOC110492179 | NA | other | upstream | 1217874 | 49024001 ~ 49034167 (+) |
| LOC110492164 | mitf | other | upstream | 1939196 | 48282132 ~ 48331926 (+) |
| LOC110491080 | LOC106572377 | other | upstream | 3222820 | 47026122 ~ 47029192 (+) |
| G1379959 | LOC106567238 | other | upstream | 3303795 | 46945257 ~ 46948217 (+) |
| G1384247 | NA | other | downstream | 320330 | 50572692 ~ 50573050 (+) |
| nphp4 | nphp4 | other | downstream | 1029041 | 51118978 ~ 51310839 (+) |
| G1386227 | ajap1 | other | downstream | 1273651 | 51526013 ~ 51526813 (+) |
| G1386254 | LOC106566883 | other | downstream | 1307791 | 51560153 ~ 51560878 (+) |
