Gene
RNA
| Item | Value |
|---|---|
| gene id | G1384076 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50294897 ~ 50295441 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1580872 | True | 349 | lncRNA | 0.39 | 2 | 50294897 | 50295441 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136219 | LOC106566896 | coding | upstream | 85700 | 50121066 ~ 50210247 (+) |
| LOC110492206 | LOC106566897 | coding | upstream | 279374 | 49996722 ~ 50015523 (+) |
| znf341 | LOC106566899 | coding | upstream | 343845 | 49939245 ~ 49951052 (+) |
| tti1 | tti1 | coding | upstream | 496880 | 49789953 ~ 49798017 (+) |
| tgm2a | LOC106566906 | coding | upstream | 508586 | 49778654 ~ 49786311 (+) |
| LOC110492209 | LOC106566893 | coding | downstream | 28704 | 50324145 ~ 50326821 (+) |
| LOC110492210 | LOC106566890 | coding | downstream | 194796 | 50490237 ~ 50796195 (+) |
| LOC110492909 | NA | coding | downstream | 643283 | 50938724 ~ 50939714 (+) |
| LOC118939554 | NA | coding | downstream | 792660 | 51088101 ~ 51094492 (+) |
| c16h1orf174 | LOC106566886 | coding | downstream | 814667 | 51110108 ~ 51113467 (+) |
| G1384063 | NA | non-coding | upstream | 42535 | 50252012 ~ 50252362 (+) |
| G1384061 | NA | non-coding | upstream | 43982 | 50249583 ~ 50250915 (+) |
| G1384055 | NA | non-coding | upstream | 54304 | 50240362 ~ 50240593 (+) |
| G1384050 | NA | non-coding | upstream | 63268 | 50231405 ~ 50231629 (+) |
| G1384045 | NA | non-coding | upstream | 71637 | 50223043 ~ 50223260 (+) |
| G1384058 | NA | non-coding | downstream | 18356 | 50313797 ~ 50314363 (+) |
| G1384086 | NA | non-coding | downstream | 33914 | 50329355 ~ 50329678 (+) |
| G1384092 | NA | non-coding | downstream | 40413 | 50335854 ~ 50336083 (+) |
| G1384093 | NA | non-coding | downstream | 41194 | 50336635 ~ 50336933 (+) |
| G1384110 | NA | non-coding | downstream | 65314 | 50360755 ~ 50364355 (+) |
| LOC110492182 | LOC106566913 | other | upstream | 1045022 | 49202107 ~ 49258042 (+) |
| LOC110492179 | NA | other | upstream | 1260759 | 49024001 ~ 49034167 (+) |
| LOC110492164 | mitf | other | upstream | 1982081 | 48282132 ~ 48331926 (+) |
| LOC110491080 | LOC106572377 | other | upstream | 3265705 | 47026122 ~ 47029192 (+) |
| G1379959 | LOC106567238 | other | upstream | 3346680 | 46945257 ~ 46948217 (+) |
| G1384247 | NA | other | downstream | 277251 | 50572692 ~ 50573050 (+) |
| nphp4 | nphp4 | other | downstream | 985962 | 51118978 ~ 51310839 (+) |
| G1386227 | ajap1 | other | downstream | 1230572 | 51526013 ~ 51526813 (+) |
| G1386254 | LOC106566883 | other | downstream | 1264712 | 51560153 ~ 51560878 (+) |
