G1384093


Basic Information

Item Value
gene id G1384093
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 50336635 ~ 50336933 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1580889
catacaaggagaagactgatcagagatgcagccaagagtcccatgatcactctggatgaactgcagagatctacagctgaggtgagagactctgtccataggacaacaatcagtcaaagtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccacaagccacctgggagacacaccaaacatgtgaaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1580889 True 299 lncRNA 0.42 1 50336635 50336933

Neighbor

gene id symbol gene type direction distance location
LOC110492209 LOC106566893 coding upstream 9814 50324145 ~ 50326821 (+)
LOC110492207 LOC106566895 coding upstream 25590 50241978 ~ 50311045 (+)
LOC100136219 LOC106566896 coding upstream 127438 50121066 ~ 50210247 (+)
LOC110492206 LOC106566897 coding upstream 321112 49996722 ~ 50015523 (+)
znf341 LOC106566899 coding upstream 385583 49939245 ~ 49951052 (+)
LOC110492210 LOC106566890 coding downstream 153304 50490237 ~ 50796195 (+)
LOC110492909 NA coding downstream 601791 50938724 ~ 50939714 (+)
LOC118939554 NA coding downstream 751168 51088101 ~ 51094492 (+)
c16h1orf174 LOC106566886 coding downstream 773175 51110108 ~ 51113467 (+)
nphp4 nphp4 coding downstream 782045 51118978 ~ 51310839 (+)
G1384092 NA non-coding upstream 552 50335854 ~ 50336083 (+)
G1384086 NA non-coding upstream 6957 50329355 ~ 50329678 (+)
G1384058 NA non-coding upstream 22272 50313797 ~ 50314363 (+)
G1384076 NA non-coding upstream 41194 50294897 ~ 50295441 (+)
G1384063 NA non-coding upstream 84273 50252012 ~ 50252362 (+)
G1384110 NA non-coding downstream 23822 50360755 ~ 50364355 (+)
G1384102 NA non-coding downstream 54768 50391701 ~ 50418540 (+)
G1384140 NA non-coding downstream 84564 50421497 ~ 50421979 (+)
G1384141 NA non-coding downstream 85664 50422597 ~ 50422890 (+)
G1384147 NA non-coding downstream 93578 50430511 ~ 50430727 (+)
LOC110492182 LOC106566913 other upstream 1086760 49202107 ~ 49258042 (+)
LOC110492179 NA other upstream 1302497 49024001 ~ 49034167 (+)
LOC110492164 mitf other upstream 2023819 48282132 ~ 48331926 (+)
LOC110491080 LOC106572377 other upstream 3307443 47026122 ~ 47029192 (+)
G1379959 LOC106567238 other upstream 3388418 46945257 ~ 46948217 (+)
G1384247 NA other downstream 235759 50572692 ~ 50573050 (+)
G1386227 ajap1 other downstream 1189080 51526013 ~ 51526813 (+)
G1386254 LOC106566883 other downstream 1223220 51560153 ~ 51560878 (+)

Expression


Co-expression Network