Gene
RNA
| Item | Value |
|---|---|
| gene id | G1384141 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50422597 ~ 50422890 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1580972 | True | 294 | lncRNA | 0.45 | 1 | 50422597 | 50422890 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492209 | LOC106566893 | coding | upstream | 95776 | 50324145 ~ 50326821 (+) |
| LOC110492207 | LOC106566895 | coding | upstream | 111552 | 50241978 ~ 50311045 (+) |
| LOC100136219 | LOC106566896 | coding | upstream | 213400 | 50121066 ~ 50210247 (+) |
| LOC110492206 | LOC106566897 | coding | upstream | 407074 | 49996722 ~ 50015523 (+) |
| znf341 | LOC106566899 | coding | upstream | 471545 | 49939245 ~ 49951052 (+) |
| LOC110492210 | LOC106566890 | coding | downstream | 67347 | 50490237 ~ 50796195 (+) |
| LOC110492909 | NA | coding | downstream | 515834 | 50938724 ~ 50939714 (+) |
| LOC118939554 | NA | coding | downstream | 665211 | 51088101 ~ 51094492 (+) |
| c16h1orf174 | LOC106566886 | coding | downstream | 687218 | 51110108 ~ 51113467 (+) |
| nphp4 | nphp4 | coding | downstream | 696088 | 51118978 ~ 51310839 (+) |
| G1384140 | NA | non-coding | upstream | 618 | 50421497 ~ 50421979 (+) |
| G1384102 | NA | non-coding | upstream | 4057 | 50391701 ~ 50418540 (+) |
| G1384110 | NA | non-coding | upstream | 58242 | 50360755 ~ 50364355 (+) |
| G1384093 | NA | non-coding | upstream | 85664 | 50336635 ~ 50336933 (+) |
| G1384092 | NA | non-coding | upstream | 86514 | 50335854 ~ 50336083 (+) |
| G1384147 | NA | non-coding | downstream | 7621 | 50430511 ~ 50430727 (+) |
| G1384161 | NA | non-coding | downstream | 22258 | 50445148 ~ 50445436 (+) |
| G1384162 | NA | non-coding | downstream | 23294 | 50446184 ~ 50446439 (+) |
| G1384175 | NA | non-coding | downstream | 44685 | 50467575 ~ 50467852 (+) |
| G1384185 | NA | non-coding | downstream | 59103 | 50481993 ~ 50482224 (+) |
| LOC110492182 | LOC106566913 | other | upstream | 1172722 | 49202107 ~ 49258042 (+) |
| LOC110492179 | NA | other | upstream | 1388459 | 49024001 ~ 49034167 (+) |
| LOC110492164 | mitf | other | upstream | 2109781 | 48282132 ~ 48331926 (+) |
| LOC110491080 | LOC106572377 | other | upstream | 3393405 | 47026122 ~ 47029192 (+) |
| G1379959 | LOC106567238 | other | upstream | 3474380 | 46945257 ~ 46948217 (+) |
| G1384247 | NA | other | downstream | 149802 | 50572692 ~ 50573050 (+) |
| G1386227 | ajap1 | other | downstream | 1103123 | 51526013 ~ 51526813 (+) |
| G1386254 | LOC106566883 | other | downstream | 1137263 | 51560153 ~ 51560878 (+) |
