Gene
RNA
| Item | Value |
|---|---|
| gene id | G1385196 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50542071 ~ 50542292 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1582110 | True | 222 | lncRNA | 0.45 | 1 | 50542071 | 50542292 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492208 | LOC106566894 | coding | downstream | 223298 | 50314916 ~ 50318773 (-) |
| itchb | LOC106566898 | coding | downstream | 570778 | 49950665 ~ 49971293 (-) |
| e2f1 | LOC106566901 | coding | downstream | 603183 | 49933079 ~ 49938888 (-) |
| LOC110491088 | LOC106566900 | coding | downstream | 608321 | 49927464 ~ 49933750 (-) |
| LOC110492202 | LOC106566902 | coding | downstream | 661249 | 49840098 ~ 49880822 (-) |
| mad2l2 | mad2l2 | coding | upstream | 479164 | 51021456 ~ 51031919 (-) |
| LOC110491089 | lrrc47 | coding | upstream | 498831 | 51041123 ~ 51043794 (-) |
| LOC110491090 | fam57b | coding | upstream | 534486 | 51076778 ~ 51077359 (-) |
| LOC110492214 | LOC106566770 | coding | upstream | 559491 | 51101783 ~ 51103933 (-) |
| dffb | LOC106566885 | coding | upstream | 571299 | 51113403 ~ 51117850 (-) |
| G1385194 | NA | non-coding | downstream | 3021 | 50538836 ~ 50539050 (-) |
| G1385168 | NA | non-coding | downstream | 58439 | 50483369 ~ 50483632 (-) |
| G1385158 | NA | non-coding | downstream | 73643 | 50468031 ~ 50468428 (-) |
| G1385157 | NA | non-coding | downstream | 74093 | 50467764 ~ 50467978 (-) |
| G1385153 | NA | non-coding | downstream | 78674 | 50463184 ~ 50463397 (-) |
| G1385203 | NA | non-coding | upstream | 12165 | 50554457 ~ 50554677 (-) |
| G1385206 | NA | non-coding | upstream | 20336 | 50562628 ~ 50563024 (-) |
| G1385207 | NA | non-coding | upstream | 21949 | 50564241 ~ 50564723 (-) |
| G1385211 | NA | non-coding | upstream | 30708 | 50573000 ~ 50573308 (-) |
| G1385212 | NA | non-coding | upstream | 32026 | 50574318 ~ 50574614 (-) |
| G1384875 | NA | other | downstream | 476254 | 50064821 ~ 50065817 (-) |
| LOC110491086 | LOC106566907 | other | downstream | 822532 | 49576512 ~ 49719539 (-) |
| LOC110492187 | LOC106936674 | other | downstream | 1345745 | 49179653 ~ 49196706 (-) |
| G1382894 | mitf | other | downstream | 2229113 | 48282213 ~ 48312958 (-) |
| G1382721 | NA | other | downstream | 2595849 | 47943379 ~ 47946222 (-) |
| G1385645 | NA | other | upstream | 513339 | 51055631 ~ 51056061 (-) |
| G1385888 | NA | other | upstream | 548353 | 51090645 ~ 51128648 (-) |
| LOC110492226 | LOC106572002 | other | upstream | 1440842 | 51978399 ~ 51990025 (-) |
| spen | LOC106566857 | other | upstream | 1876584 | 52379551 ~ 52428869 (-) |
