XLOC_032872


Basic Information

Item Value
gene id XLOC_032872
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 25267951 ~ 25268308 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065151
tattaatattctaaaccacctcatactaaaattggagtcagatatgagttaaatttaagCTAATATGTTTAAGCAGCTGTCACTGCACACAAatatgtgaaatagcctactCTGAGCTCTGTGCTATTTAATCCAAAATGGTGcatgaaacaatattttttggAATATTTTCAAACATGTTGTGATTGACTGACCAAGTAAACTAAGCACTACAATATATTggtcaaactttacaataaggtttcattagttaaaccttaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065151 True 261 lncRNA 0.30 2 25267951 25268308

Neighbor

gene id symbol gene type direction distance location
XLOC_032871 lrrc8c coding downstream 66141 25189837 ~ 25201810 (-)
XLOC_032869 lrrc8db coding downstream 78212 25167250 ~ 25189739 (-)
XLOC_032870 CR790380.1 coding downstream 79168 25188023 ~ 25188783 (-)
XLOC_032868 znf326 coding downstream 102258 25157331 ~ 25165693 (-)
XLOC_032867 si:dkey-238n5.3 coding downstream 112865 25145265 ~ 25155086 (-)
XLOC_032873 PKN2 coding upstream 44079 25312387 ~ 25384792 (-)
XLOC_032874 lmo4b coding upstream 665428 25933736 ~ 25952870 (-)
XLOC_032875 hs2st1b coding upstream 795654 26063962 ~ 26225814 (-)
XLOC_032876 NA coding upstream 1022475 26290783 ~ 26309847 (-)
XLOC_032877 sox14 coding upstream 1289671 26557979 ~ 26559921 (-)
XLOC_032866 NA non-coding downstream 398805 24850093 ~ 24869146 (-)
XLOC_032865 BX005463.1 non-coding downstream 425665 24842170 ~ 24842286 (-)
XLOC_032864 BX004768.2 non-coding downstream 482008 24785827 ~ 24785943 (-)
XLOC_032859 NA non-coding downstream 1048774 24217928 ~ 24219177 (-)
XLOC_032878 NA non-coding upstream 1293673 26561981 ~ 26674943 (-)
XLOC_032879 NA non-coding upstream 1556642 26824950 ~ 26825924 (-)
XLOC_032881 NA non-coding upstream 1767344 27035652 ~ 27038371 (-)
XLOC_032886 NA non-coding upstream 2222429 27490737 ~ 27491747 (-)

Expression


Co-expression Network