Gene
RNA
| Item | Value |
|---|---|
| gene id | G1385224 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50600899 ~ 50601160 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110527629 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1582138 | True | 262 | lncRNA | 0.36 | 1 | 50600899 | 50601160 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492208 | LOC106566894 | coding | downstream | 282126 | 50314916 ~ 50318773 (-) |
| itchb | LOC106566898 | coding | downstream | 629606 | 49950665 ~ 49971293 (-) |
| e2f1 | LOC106566901 | coding | downstream | 662011 | 49933079 ~ 49938888 (-) |
| LOC110491088 | LOC106566900 | coding | downstream | 667149 | 49927464 ~ 49933750 (-) |
| LOC110492202 | LOC106566902 | coding | downstream | 720077 | 49840098 ~ 49880822 (-) |
| mad2l2 | mad2l2 | coding | upstream | 420296 | 51021456 ~ 51031919 (-) |
| LOC110491089 | lrrc47 | coding | upstream | 439963 | 51041123 ~ 51043794 (-) |
| LOC110491090 | fam57b | coding | upstream | 475618 | 51076778 ~ 51077359 (-) |
| LOC110492214 | LOC106566770 | coding | upstream | 500623 | 51101783 ~ 51103933 (-) |
| dffb | LOC106566885 | coding | upstream | 512431 | 51113403 ~ 51117850 (-) |
| G1385223 | NA | non-coding | downstream | 855 | 50599732 ~ 50600044 (-) |
| G1385218 | NA | non-coding | downstream | 17837 | 50582810 ~ 50583062 (-) |
| G1385213 | NA | non-coding | downstream | 25729 | 50574913 ~ 50575170 (-) |
| G1385212 | NA | non-coding | downstream | 26285 | 50574318 ~ 50574614 (-) |
| G1385211 | NA | non-coding | downstream | 27591 | 50573000 ~ 50573308 (-) |
| G1385226 | NA | non-coding | upstream | 6744 | 50607904 ~ 50608459 (-) |
| G1385227 | NA | non-coding | upstream | 7597 | 50608757 ~ 50609111 (-) |
| G1385228 | NA | non-coding | upstream | 9029 | 50610189 ~ 50610585 (-) |
| G1385229 | NA | non-coding | upstream | 9667 | 50610827 ~ 50611773 (-) |
| G1385235 | NA | non-coding | upstream | 25285 | 50626445 ~ 50626697 (-) |
| G1384875 | NA | other | downstream | 535082 | 50064821 ~ 50065817 (-) |
| LOC110491086 | LOC106566907 | other | downstream | 881360 | 49576512 ~ 49719539 (-) |
| LOC110492187 | LOC106936674 | other | downstream | 1404573 | 49179653 ~ 49196706 (-) |
| G1382894 | mitf | other | downstream | 2287941 | 48282213 ~ 48312958 (-) |
| G1382721 | NA | other | downstream | 2654677 | 47943379 ~ 47946222 (-) |
| G1385645 | NA | other | upstream | 454471 | 51055631 ~ 51056061 (-) |
| G1385888 | NA | other | upstream | 489485 | 51090645 ~ 51128648 (-) |
| LOC110492226 | LOC106572002 | other | upstream | 1381974 | 51978399 ~ 51990025 (-) |
| spen | LOC106566857 | other | upstream | 1817716 | 52379551 ~ 52428869 (-) |
