XLOC_032876



Basic Information


Item Value
gene id XLOC_032876
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 26290783 ~ 26309847 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00065152
CCACTTACTCCGGAACTCAGGAGGATACATAAGGCAGTTTTTATGCTCTGTTTTCATGTAAAAGTCATTTGAGGAGAGTACAGAGTTTATAAAACAGCTATGAAGAATGTTTGGCTTTTTTCTACTTAAACAGACTAAGGAGAAAAGTAGAGGACAAAGACATTTCAACAACAGAATGATCATACGAACTGTGTCCAGTCCAGTAAGGGAGCTGGGGGCCACGGGTGAAGGAACCTTTTGGTGGTGGTGCTGCTGTGCCAGTGTGTGCTGTGGGACACTTCTGATGCACTAGGGTGTGTGGCTGGAGTGTGCTGTGGTGAAAAGTGTATGGTGTATTTCACGGGTGATCACTCCTGTGGGTAGCCCCAGTCCTGTGATTGAATGGCTCTATTTGGGAACATTGATTTGGAGAGTATAATATGGAGTGTTTTCTGTGTGCGGGTTGAAAAATAATCACTTTCAGTGCCTTTTGTGAGTAAGCCCTCCAGAGTGGACTGGTCATCAGGACCTATTTTAGTGTTAGCCTTTTTAAAGAATTGTGAAtaaacttttttgtatttttgtattta

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00065152 True 569 lncRNA 0.42 2 26290783 26309847

Neighbor


gene id symbol gene type direction distance location
XLOC_032875 hs2st1b coding downstream 64969 26063962 ~ 26225814 (-)
XLOC_032874 lmo4b coding downstream 337913 25933736 ~ 25952870 (-)
XLOC_032873 PKN2 coding downstream 905991 25312387 ~ 25384792 (-)
XLOC_032872 NA coding downstream 1022475 25267951 ~ 25268308 (-)
XLOC_032871 lrrc8c coding downstream 1088973 25189837 ~ 25201810 (-)
XLOC_032877 sox14 coding upstream 248132 26557979 ~ 26559921 (-)
XLOC_032878 NA coding upstream 252134 26561981 ~ 26674943 (-)
XLOC_032879 NA coding upstream 515103 26824950 ~ 26825924 (-)
XLOC_032880 hdlbpa coding upstream 564992 26874839 ~ 26895750 (-)
XLOC_032881 NA coding upstream 725805 27035652 ~ 27038371 (-)
XLOC_032870 CR790380.1 non-coding downstream 1102000 25188023 ~ 25188783 (-)
XLOC_032866 NA non-coding downstream 1421637 24850093 ~ 24869146 (-)
XLOC_032865 BX005463.1 non-coding downstream 1448497 24842170 ~ 24842286 (-)
XLOC_032864 BX004768.2 non-coding downstream 1504840 24785827 ~ 24785943 (-)
XLOC_032886 NA non-coding upstream 1180890 27490737 ~ 27491747 (-)
XLOC_032887 NA non-coding upstream 1310828 27620675 ~ 27623521 (-)

Expression



Co-expression Network