Gene
RNA
| Item | Value |
|---|---|
| gene id | G1385244 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50639751 ~ 50639974 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1582159 | True | 224 | lncRNA | 0.47 | 1 | 50639751 | 50639974 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492208 | LOC106566894 | coding | downstream | 320978 | 50314916 ~ 50318773 (-) |
| itchb | LOC106566898 | coding | downstream | 668458 | 49950665 ~ 49971293 (-) |
| e2f1 | LOC106566901 | coding | downstream | 700863 | 49933079 ~ 49938888 (-) |
| LOC110491088 | LOC106566900 | coding | downstream | 706001 | 49927464 ~ 49933750 (-) |
| LOC110492202 | LOC106566902 | coding | downstream | 758929 | 49840098 ~ 49880822 (-) |
| mad2l2 | mad2l2 | coding | upstream | 381482 | 51021456 ~ 51031919 (-) |
| LOC110491089 | lrrc47 | coding | upstream | 401149 | 51041123 ~ 51043794 (-) |
| LOC110491090 | fam57b | coding | upstream | 436804 | 51076778 ~ 51077359 (-) |
| LOC110492214 | LOC106566770 | coding | upstream | 461809 | 51101783 ~ 51103933 (-) |
| dffb | LOC106566885 | coding | upstream | 473617 | 51113403 ~ 51117850 (-) |
| G1385241 | NA | non-coding | downstream | 3606 | 50635908 ~ 50636145 (-) |
| G1385238 | NA | non-coding | downstream | 5634 | 50633860 ~ 50634117 (-) |
| G1385237 | NA | non-coding | downstream | 6449 | 50633071 ~ 50633302 (-) |
| G1385236 | NA | non-coding | downstream | 9787 | 50629743 ~ 50629964 (-) |
| G1385235 | NA | non-coding | downstream | 13054 | 50626445 ~ 50626697 (-) |
| G1385245 | NA | non-coding | upstream | 2815 | 50642789 ~ 50643292 (-) |
| G1385250 | NA | non-coding | upstream | 13306 | 50653280 ~ 50653495 (-) |
| G1385251 | NA | non-coding | upstream | 19475 | 50659449 ~ 50659757 (-) |
| G1385254 | NA | non-coding | upstream | 21241 | 50661215 ~ 50661440 (-) |
| G1385257 | NA | non-coding | upstream | 39325 | 50679299 ~ 50679681 (-) |
| G1384875 | NA | other | downstream | 573934 | 50064821 ~ 50065817 (-) |
| LOC110491086 | LOC106566907 | other | downstream | 920212 | 49576512 ~ 49719539 (-) |
| LOC110492187 | LOC106936674 | other | downstream | 1443425 | 49179653 ~ 49196706 (-) |
| G1382894 | mitf | other | downstream | 2326793 | 48282213 ~ 48312958 (-) |
| G1382721 | NA | other | downstream | 2693529 | 47943379 ~ 47946222 (-) |
| G1385645 | NA | other | upstream | 415657 | 51055631 ~ 51056061 (-) |
| G1385888 | NA | other | upstream | 450671 | 51090645 ~ 51128648 (-) |
| LOC110492226 | LOC106572002 | other | upstream | 1343160 | 51978399 ~ 51990025 (-) |
| spen | LOC106566857 | other | upstream | 1778902 | 52379551 ~ 52428869 (-) |
