G1385245


Basic Information

Item Value
gene id G1385245
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 50642789 ~ 50643292 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1582160
ccaagacttcacaaaatgggacaaacaccaaattgagactctgcacgcagaattctgcaaaaatatcctccacgtaacaacgtagaacaccaaataaggcatgcagagcagaattaggccgatacccactaattatcaaaatccagaaaagagccgttaaattctacaaccacctaaaaggaagtgattcccaaaccttccataacaaagccatcacctacagagagatgaacctggagaagagtcccctaagcaagctggtcctggggctctgttcacaaacacaaacacaccatacagagccccaggacagcagcacaattagacccaaccaaatcatgagaaaacaaaaagatatttacttgacacattggaaagaattaacaaaaaaacagagcaaactagaatgctatttggccctaaacagagagtacacagcggcagaatacctgaccactgtgactgacccaaaattaaggaaagctttgactatgtacagactcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1582160 True 504 lncRNA 0.42 1 50642789 50643292

Neighbor

gene id symbol gene type direction distance location
LOC110492208 LOC106566894 coding downstream 324016 50314916 ~ 50318773 (-)
itchb LOC106566898 coding downstream 671496 49950665 ~ 49971293 (-)
e2f1 LOC106566901 coding downstream 703901 49933079 ~ 49938888 (-)
LOC110491088 LOC106566900 coding downstream 709039 49927464 ~ 49933750 (-)
LOC110492202 LOC106566902 coding downstream 761967 49840098 ~ 49880822 (-)
mad2l2 mad2l2 coding upstream 378164 51021456 ~ 51031919 (-)
LOC110491089 lrrc47 coding upstream 397831 51041123 ~ 51043794 (-)
LOC110491090 fam57b coding upstream 433486 51076778 ~ 51077359 (-)
LOC110492214 LOC106566770 coding upstream 458491 51101783 ~ 51103933 (-)
dffb LOC106566885 coding upstream 470299 51113403 ~ 51117850 (-)
G1385244 NA non-coding downstream 2815 50639751 ~ 50639974 (-)
G1385241 NA non-coding downstream 6644 50635908 ~ 50636145 (-)
G1385238 NA non-coding downstream 8672 50633860 ~ 50634117 (-)
G1385237 NA non-coding downstream 9487 50633071 ~ 50633302 (-)
G1385236 NA non-coding downstream 12825 50629743 ~ 50629964 (-)
G1385250 NA non-coding upstream 9988 50653280 ~ 50653495 (-)
G1385251 NA non-coding upstream 16157 50659449 ~ 50659757 (-)
G1385254 NA non-coding upstream 17923 50661215 ~ 50661440 (-)
G1385257 NA non-coding upstream 36007 50679299 ~ 50679681 (-)
G1385258 NA non-coding upstream 36740 50680032 ~ 50680533 (-)
G1384875 NA other downstream 576972 50064821 ~ 50065817 (-)
LOC110491086 LOC106566907 other downstream 923250 49576512 ~ 49719539 (-)
LOC110492187 LOC106936674 other downstream 1446463 49179653 ~ 49196706 (-)
G1382894 mitf other downstream 2329831 48282213 ~ 48312958 (-)
G1382721 NA other downstream 2696567 47943379 ~ 47946222 (-)
G1385645 NA other upstream 412339 51055631 ~ 51056061 (-)
G1385888 NA other upstream 447353 51090645 ~ 51128648 (-)
LOC110492226 LOC106572002 other upstream 1339842 51978399 ~ 51990025 (-)
spen LOC106566857 other upstream 1775584 52379551 ~ 52428869 (-)

Expression


Co-expression Network