Gene
RNA
| Item | Value |
|---|---|
| gene id | G1385254 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50661215 ~ 50661440 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: plexin-A1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1582169 | True | 226 | lncRNA | 0.51 | 1 | 50661215 | 50661440 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492208 | LOC106566894 | coding | downstream | 342442 | 50314916 ~ 50318773 (-) |
| itchb | LOC106566898 | coding | downstream | 689922 | 49950665 ~ 49971293 (-) |
| e2f1 | LOC106566901 | coding | downstream | 722327 | 49933079 ~ 49938888 (-) |
| LOC110491088 | LOC106566900 | coding | downstream | 727465 | 49927464 ~ 49933750 (-) |
| LOC110492202 | LOC106566902 | coding | downstream | 780393 | 49840098 ~ 49880822 (-) |
| mad2l2 | mad2l2 | coding | upstream | 360016 | 51021456 ~ 51031919 (-) |
| LOC110491089 | lrrc47 | coding | upstream | 379683 | 51041123 ~ 51043794 (-) |
| LOC110491090 | fam57b | coding | upstream | 415338 | 51076778 ~ 51077359 (-) |
| LOC110492214 | LOC106566770 | coding | upstream | 440343 | 51101783 ~ 51103933 (-) |
| dffb | LOC106566885 | coding | upstream | 452151 | 51113403 ~ 51117850 (-) |
| G1385251 | NA | non-coding | downstream | 1458 | 50659449 ~ 50659757 (-) |
| G1385250 | NA | non-coding | downstream | 7720 | 50653280 ~ 50653495 (-) |
| G1385245 | NA | non-coding | downstream | 17923 | 50642789 ~ 50643292 (-) |
| G1385244 | NA | non-coding | downstream | 21241 | 50639751 ~ 50639974 (-) |
| G1385241 | NA | non-coding | downstream | 25070 | 50635908 ~ 50636145 (-) |
| G1385257 | NA | non-coding | upstream | 17859 | 50679299 ~ 50679681 (-) |
| G1385258 | NA | non-coding | upstream | 18592 | 50680032 ~ 50680533 (-) |
| G1385260 | NA | non-coding | upstream | 19906 | 50681346 ~ 50682148 (-) |
| G1385261 | LOC106572245 | non-coding | upstream | 21891 | 50683331 ~ 50683566 (-) |
| G1385329 | NA | non-coding | upstream | 138746 | 50800186 ~ 50800423 (-) |
| G1384875 | NA | other | downstream | 595398 | 50064821 ~ 50065817 (-) |
| LOC110491086 | LOC106566907 | other | downstream | 941676 | 49576512 ~ 49719539 (-) |
| LOC110492187 | LOC106936674 | other | downstream | 1464889 | 49179653 ~ 49196706 (-) |
| G1382894 | mitf | other | downstream | 2348257 | 48282213 ~ 48312958 (-) |
| G1382721 | NA | other | downstream | 2714993 | 47943379 ~ 47946222 (-) |
| G1385645 | NA | other | upstream | 394191 | 51055631 ~ 51056061 (-) |
| G1385888 | NA | other | upstream | 429205 | 51090645 ~ 51128648 (-) |
| LOC110492226 | LOC106572002 | other | upstream | 1321694 | 51978399 ~ 51990025 (-) |
| spen | LOC106566857 | other | upstream | 1757436 | 52379551 ~ 52428869 (-) |
