Gene
RNA
| Item | Value |
|---|---|
| gene id | G1385348 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50833909 ~ 50834212 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1582265 | True | 304 | lncRNA | 0.44 | 1 | 50833909 | 50834212 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492208 | LOC106566894 | coding | downstream | 515136 | 50314916 ~ 50318773 (-) |
| itchb | LOC106566898 | coding | downstream | 862616 | 49950665 ~ 49971293 (-) |
| e2f1 | LOC106566901 | coding | downstream | 895021 | 49933079 ~ 49938888 (-) |
| LOC110491088 | LOC106566900 | coding | downstream | 900159 | 49927464 ~ 49933750 (-) |
| LOC110492202 | LOC106566902 | coding | downstream | 953087 | 49840098 ~ 49880822 (-) |
| mad2l2 | mad2l2 | coding | upstream | 187244 | 51021456 ~ 51031919 (-) |
| LOC110491089 | lrrc47 | coding | upstream | 206911 | 51041123 ~ 51043794 (-) |
| LOC110491090 | fam57b | coding | upstream | 242566 | 51076778 ~ 51077359 (-) |
| LOC110492214 | LOC106566770 | coding | upstream | 267571 | 51101783 ~ 51103933 (-) |
| dffb | LOC106566885 | coding | upstream | 279379 | 51113403 ~ 51117850 (-) |
| G1385329 | NA | non-coding | downstream | 33486 | 50800186 ~ 50800423 (-) |
| G1385261 | LOC106572245 | non-coding | downstream | 150343 | 50683331 ~ 50683566 (-) |
| G1385260 | NA | non-coding | downstream | 151761 | 50681346 ~ 50682148 (-) |
| G1385258 | NA | non-coding | downstream | 153376 | 50680032 ~ 50680533 (-) |
| G1385257 | NA | non-coding | downstream | 154228 | 50679299 ~ 50679681 (-) |
| G1385418 | NA | non-coding | upstream | 49623 | 50883835 ~ 50884151 (-) |
| G1385438 | LOC106586415 | non-coding | upstream | 72091 | 50906303 ~ 50906565 (-) |
| G1385440 | NA | non-coding | upstream | 74775 | 50908987 ~ 50909209 (-) |
| G1385441 | NA | non-coding | upstream | 75470 | 50909682 ~ 50909881 (-) |
| G1385450 | NA | non-coding | upstream | 85670 | 50919882 ~ 50920178 (-) |
| G1384875 | NA | other | downstream | 768092 | 50064821 ~ 50065817 (-) |
| LOC110491086 | LOC106566907 | other | downstream | 1114370 | 49576512 ~ 49719539 (-) |
| LOC110492187 | LOC106936674 | other | downstream | 1637583 | 49179653 ~ 49196706 (-) |
| G1382894 | mitf | other | downstream | 2520951 | 48282213 ~ 48312958 (-) |
| G1382721 | NA | other | downstream | 2887687 | 47943379 ~ 47946222 (-) |
| G1385645 | NA | other | upstream | 221419 | 51055631 ~ 51056061 (-) |
| G1385888 | NA | other | upstream | 256433 | 51090645 ~ 51128648 (-) |
| LOC110492226 | LOC106572002 | other | upstream | 1148922 | 51978399 ~ 51990025 (-) |
| spen | LOC106566857 | other | upstream | 1584664 | 52379551 ~ 52428869 (-) |
