Gene
RNA
| Item | Value |
|---|---|
| gene id | G1385450 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 50919882 ~ 50920178 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC108938391 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1582368 | True | 297 | lncRNA | 0.38 | 1 | 50919882 | 50920178 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492208 | LOC106566894 | coding | downstream | 601109 | 50314916 ~ 50318773 (-) |
| itchb | LOC106566898 | coding | downstream | 948589 | 49950665 ~ 49971293 (-) |
| e2f1 | LOC106566901 | coding | downstream | 980994 | 49933079 ~ 49938888 (-) |
| LOC110491088 | LOC106566900 | coding | downstream | 986132 | 49927464 ~ 49933750 (-) |
| LOC110492202 | LOC106566902 | coding | downstream | 1039060 | 49840098 ~ 49880822 (-) |
| mad2l2 | mad2l2 | coding | upstream | 101278 | 51021456 ~ 51031919 (-) |
| LOC110491089 | lrrc47 | coding | upstream | 120945 | 51041123 ~ 51043794 (-) |
| LOC110491090 | fam57b | coding | upstream | 156600 | 51076778 ~ 51077359 (-) |
| LOC110492214 | LOC106566770 | coding | upstream | 181605 | 51101783 ~ 51103933 (-) |
| dffb | LOC106566885 | coding | upstream | 193413 | 51113403 ~ 51117850 (-) |
| G1385441 | NA | non-coding | downstream | 10001 | 50909682 ~ 50909881 (-) |
| G1385440 | NA | non-coding | downstream | 10673 | 50908987 ~ 50909209 (-) |
| G1385438 | LOC106586415 | non-coding | downstream | 13317 | 50906303 ~ 50906565 (-) |
| G1385418 | NA | non-coding | downstream | 35731 | 50883835 ~ 50884151 (-) |
| G1385348 | NA | non-coding | downstream | 85670 | 50833909 ~ 50834212 (-) |
| G1385587 | NA | non-coding | upstream | 89634 | 51009812 ~ 51010049 (-) |
| G1385590 | NA | non-coding | upstream | 93366 | 51013544 ~ 51013778 (-) |
| G1385591 | NA | non-coding | upstream | 94544 | 51014722 ~ 51014959 (-) |
| G1385592 | NA | non-coding | upstream | 94895 | 51015073 ~ 51015415 (-) |
| G1384875 | NA | other | downstream | 854065 | 50064821 ~ 50065817 (-) |
| LOC110491086 | LOC106566907 | other | downstream | 1200343 | 49576512 ~ 49719539 (-) |
| LOC110492187 | LOC106936674 | other | downstream | 1723556 | 49179653 ~ 49196706 (-) |
| G1382894 | mitf | other | downstream | 2606924 | 48282213 ~ 48312958 (-) |
| G1382721 | NA | other | downstream | 2973660 | 47943379 ~ 47946222 (-) |
| G1385645 | NA | other | upstream | 135453 | 51055631 ~ 51056061 (-) |
| G1385888 | NA | other | upstream | 170467 | 51090645 ~ 51128648 (-) |
| LOC110492226 | LOC106572002 | other | upstream | 1062956 | 51978399 ~ 51990025 (-) |
| spen | LOC106566857 | other | upstream | 1498698 | 52379551 ~ 52428869 (-) |
