XLOC_032881


Basic Information

Item Value
gene id XLOC_032881
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 27035652 ~ 27038371 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065158
TGATTCCAAGTTCAACAAAAGCCAATCCTCTAAATAGTAACAGTCACCTAATAATGACCTTCAAAGACTTACTTTGACCTGCTCTGCCAAAACGCCATTCAACAAAACGGCCGTCTCATCGACAAAATAAAGCTTCCTCCCTGTACCAACATCTCACCCTCGGACCTTTAAATGGGCGAAGGCACTCGATCATACAACTCCAGTTTATGAGCTACACAAGCCTGTAAACATGCTCACTGACCTTTATATTGTTTCAAGATCAGTTAGACACATTTGACAGCTCCAGTCCTTCATCTCACTTACCGCACCAGCTGGACTTCATACAAACCCTCCGTTTGTCAACTCTCCTTCAGTAGTTTTCAATCATGTTGTCCCAGGATTTTTTAGTTAACGGGACTAGATTTCTACTGAATAAACAAGAGTCCTGAAATTGAATCTCATCCTAATGACAGATTCCTCTCAGCGAAGACCTTAAAAACATCAATACAGCAAGTGTAGCATTAGCAAGATTATCTGGATCTTTAAGGAAAACGCACAAACATAACTTAATTCAGTCGATTGCATTTCTACAAGAATTATTTCAGTCTAATGTGGTTCTAAAATGCCAGATGCACACTTTGTGTTTCATTATCGAGAACACAAGAAAGAGAAATGTTGGGCGAGTTACTGAACATCAAAACGTTGACCATTATCTTCAGTCCGAGGTTGAGCAAAGCAGAGCAAACAGTCCAGAGTGAAGAATTAAGTTATGATGACGCCCCACAGAGTCAGAAAGGATAAACTGATGAGGTTTTGTTCCTGAAAACAGCGGGCCCAGCCCTCAGCTCCAGGACATCAGTCTCACACTTAGTTCCCAACGTTCACCTCTGCTGGGCCTTTGGGTACGAGCAAACTCAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065158 True 897 lncRNA 0.42 2 27035652 27038371

Neighbor

gene id symbol gene type direction distance location
XLOC_032880 hdlbpa coding downstream 139902 26874839 ~ 26895750 (-)
XLOC_032879 NA coding downstream 209728 26824950 ~ 26825924 (-)
XLOC_032878 NA coding downstream 360709 26561981 ~ 26674943 (-)
XLOC_032877 sox14 coding downstream 475731 26557979 ~ 26559921 (-)
XLOC_032876 NA coding downstream 725805 26290783 ~ 26309847 (-)
XLOC_032882 stk25a coding upstream 3223 27041594 ~ 27057702 (-)
XLOC_032883 dtymk coding upstream 66591 27104962 ~ 27108844 (-)
XLOC_032884 agxta coding upstream 74513 27112884 ~ 27123327 (-)
XLOC_032885 zgc:103559 coding upstream 88249 27126620 ~ 27139396 (-)
XLOC_032886 NA coding upstream 452366 27490737 ~ 27491747 (-)
XLOC_032872 NA non-coding downstream 1767344 25267951 ~ 25268308 (-)
XLOC_032870 CR790380.1 non-coding downstream 1846869 25188023 ~ 25188783 (-)
XLOC_032887 NA non-coding upstream 582304 27620675 ~ 27623521 (-)
XLOC_032890 NA non-coding upstream 900118 27938489 ~ 27954601 (-)
XLOC_032892 NA non-coding upstream 1086010 28124381 ~ 28130130 (-)
XLOC_032898 NA non-coding upstream 1945646 28984017 ~ 28986397 (-)

Expression


Co-expression Network