G1386059


Basic Information

Item Value
gene id G1386059
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 51361365 ~ 51362050 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1583018
cggaagtttacatataccttagccaaatacatttaaactcagtatttcacaattcctgacatttaatcccaggaaaaattccctgttttaggtcaattaggattaccactttattttaagaatgtgacatgtcagaataatagcagagagaatgatttatttcagcttgtatttctttcatcacattcccagtgggtcagacgtttacatacactcaattagtatttggtcgcattgcctttaaattgtttaacttgggtcaaacattttgggtagccttccacaagcttccccacaatgagttgggtgaattttggctcattcctccggacagagctggtgtaactcagtcaggtttgtaggcctccttgctcacacacgctttttcagttctgcccacaaattttctataggaatgaggtcaggtctttgtgatggccactccaataccttgactttgttgtccttaagccattttggcacaactttggaagtatgcttgaggtcattgtccatttggaagacccatttgcgaccaagctttaacttcctgactgatgtcttgagatgttgcttcaatatatccacataattgtctttcctcatgatgccatctattttgtgaaatgcaccagtccctcctgctgcaaagcaccctcacagcatgatgctgccacccccgtact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1583018 True 686 lncRNA 0.41 1 51361365 51362050

Neighbor

gene id symbol gene type direction distance location
dffb LOC106566885 coding downstream 243515 51113403 ~ 51117850 (-)
LOC110492214 LOC106566770 coding downstream 257432 51101783 ~ 51103933 (-)
LOC110491090 fam57b coding downstream 284006 51076778 ~ 51077359 (-)
LOC110491089 lrrc47 coding downstream 317571 51041123 ~ 51043794 (-)
mad2l2 mad2l2 coding downstream 329446 51021456 ~ 51031919 (-)
LOC110492220 LOC106566883 coding upstream 160299 51522349 ~ 51603970 (-)
LOC110491091 LOC106566924 coding upstream 328833 51690883 ~ 51717957 (-)
LOC110492221 LOC106566882 coding upstream 359920 51721970 ~ 51738292 (-)
LOC110492226 LOC106572002 coding upstream 618564 51978399 ~ 51990025 (-)
LOC110492229 LOC106566874 coding upstream 636508 51998558 ~ 52069366 (-)
G1386030 NA non-coding downstream 20833 51305494 ~ 51340532 (-)
G1385665 NA non-coding downstream 289127 51071866 ~ 51072238 (-)
G1385634 NA non-coding downstream 312985 51048066 ~ 51048380 (-)
G1386060 NA non-coding upstream 14662 51376712 ~ 51384868 (-)
G1386064 NA non-coding upstream 24176 51386226 ~ 51386542 (-)
G1386067 NA non-coding upstream 28226 51390276 ~ 51390551 (-)
G1386069 NA non-coding upstream 29389 51391439 ~ 51391669 (-)
G1386076 NA non-coding upstream 35641 51397691 ~ 51397956 (-)
G1385888 NA other downstream 232717 51090645 ~ 51128648 (-)
G1385645 NA other downstream 305304 51055631 ~ 51056061 (-)
G1384875 NA other downstream 1295548 50064821 ~ 50065817 (-)
LOC110491086 LOC106566907 other downstream 1641826 49576512 ~ 49719539 (-)
spen LOC106566857 other upstream 1056826 52379551 ~ 52428869 (-)
LOC110492250 LOC106566852 other upstream 1209660 52566433 ~ 52577143 (-)
G1388236 NA other upstream 1669882 53031932 ~ 53032921 (-)
LOC110492299 LOC106566805 other upstream 2368287 53730164 ~ 53757019 (-)

Expression


Co-expression Network