Gene
RNA
| Item | Value |
|---|---|
| gene id | G1386064 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 51386226 ~ 51386542 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ORF2 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1583024 | True | 317 | lncRNA | 0.39 | 1 | 51386226 | 51386542 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dffb | LOC106566885 | coding | downstream | 268376 | 51113403 ~ 51117850 (-) |
| LOC110492214 | LOC106566770 | coding | downstream | 282293 | 51101783 ~ 51103933 (-) |
| LOC110491090 | fam57b | coding | downstream | 308867 | 51076778 ~ 51077359 (-) |
| LOC110491089 | lrrc47 | coding | downstream | 342432 | 51041123 ~ 51043794 (-) |
| mad2l2 | mad2l2 | coding | downstream | 354307 | 51021456 ~ 51031919 (-) |
| LOC110492220 | LOC106566883 | coding | upstream | 135807 | 51522349 ~ 51603970 (-) |
| LOC110491091 | LOC106566924 | coding | upstream | 304341 | 51690883 ~ 51717957 (-) |
| LOC110492221 | LOC106566882 | coding | upstream | 335428 | 51721970 ~ 51738292 (-) |
| LOC110492226 | LOC106572002 | coding | upstream | 594072 | 51978399 ~ 51990025 (-) |
| LOC110492229 | LOC106566874 | coding | upstream | 612016 | 51998558 ~ 52069366 (-) |
| G1386060 | NA | non-coding | downstream | 1358 | 51376712 ~ 51384868 (-) |
| G1386059 | NA | non-coding | downstream | 24176 | 51361365 ~ 51362050 (-) |
| G1386030 | NA | non-coding | downstream | 45694 | 51305494 ~ 51340532 (-) |
| G1385665 | NA | non-coding | downstream | 313988 | 51071866 ~ 51072238 (-) |
| G1385634 | NA | non-coding | downstream | 337846 | 51048066 ~ 51048380 (-) |
| G1386067 | NA | non-coding | upstream | 3734 | 51390276 ~ 51390551 (-) |
| G1386069 | NA | non-coding | upstream | 4897 | 51391439 ~ 51391669 (-) |
| G1386076 | NA | non-coding | upstream | 11149 | 51397691 ~ 51397956 (-) |
| G1386077 | NA | non-coding | upstream | 13434 | 51399976 ~ 51400215 (-) |
| G1386144 | NA | non-coding | upstream | 62895 | 51449437 ~ 51449665 (-) |
| G1385888 | NA | other | downstream | 257578 | 51090645 ~ 51128648 (-) |
| G1385645 | NA | other | downstream | 330165 | 51055631 ~ 51056061 (-) |
| G1384875 | NA | other | downstream | 1320409 | 50064821 ~ 50065817 (-) |
| LOC110491086 | LOC106566907 | other | downstream | 1666687 | 49576512 ~ 49719539 (-) |
| spen | LOC106566857 | other | upstream | 1032334 | 52379551 ~ 52428869 (-) |
| LOC110492250 | LOC106566852 | other | upstream | 1185168 | 52566433 ~ 52577143 (-) |
| G1388236 | NA | other | upstream | 1645390 | 53031932 ~ 53032921 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 2343795 | 53730164 ~ 53757019 (-) |
