G1386076



Basic Information


Item Value
gene id G1386076
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 51397691 ~ 51397956 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1583036
ccctgtaactattccccaggtcgtagctgcaaatgagaacgtgttctcagtcaacttacctgttaaaataacggataaataaaatttgtcccagggtccttagcttagtgataagctttgtgggcactatggtgttgaacgctgagctgtagtcaatgaacagcattctcacataggtgttatttttgttgaggtgggaaagggcagtgtggagtgcgattgagatggcatcatctgtggatctgttggagcagaatgcgaattgg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1583036 True 266 lncRNA 0.44 1 51397691 51397956

Neighbor


gene id symbol gene type direction distance location
dffb LOC106566885 coding downstream 279841 51113403 ~ 51117850 (-)
LOC110492214 LOC106566770 coding downstream 293758 51101783 ~ 51103933 (-)
LOC110491090 fam57b coding downstream 320332 51076778 ~ 51077359 (-)
LOC110491089 lrrc47 coding downstream 353897 51041123 ~ 51043794 (-)
mad2l2 mad2l2 coding downstream 365772 51021456 ~ 51031919 (-)
LOC110492220 LOC106566883 coding upstream 124393 51522349 ~ 51603970 (-)
LOC110491091 LOC106566924 coding upstream 292927 51690883 ~ 51717957 (-)
LOC110492221 LOC106566882 coding upstream 324014 51721970 ~ 51738292 (-)
LOC110492226 LOC106572002 coding upstream 582658 51978399 ~ 51990025 (-)
LOC110492229 LOC106566874 coding upstream 600602 51998558 ~ 52069366 (-)
G1386069 NA non-coding downstream 6022 51391439 ~ 51391669 (-)
G1386067 NA non-coding downstream 7140 51390276 ~ 51390551 (-)
G1386064 NA non-coding downstream 11149 51386226 ~ 51386542 (-)
G1386060 NA non-coding downstream 12823 51376712 ~ 51384868 (-)
G1386059 NA non-coding downstream 35641 51361365 ~ 51362050 (-)
G1386077 NA non-coding upstream 2020 51399976 ~ 51400215 (-)
G1386144 NA non-coding upstream 51481 51449437 ~ 51449665 (-)
G1386146 NA non-coding upstream 52546 51450502 ~ 51450742 (-)
G1386157 NA non-coding upstream 60786 51458742 ~ 51458950 (-)
G1386166 NA non-coding upstream 67432 51465388 ~ 51465592 (-)
G1385888 NA other downstream 269043 51090645 ~ 51128648 (-)
G1385645 NA other downstream 341630 51055631 ~ 51056061 (-)
G1384875 NA other downstream 1331874 50064821 ~ 50065817 (-)
LOC110491086 LOC106566907 other downstream 1678152 49576512 ~ 49719539 (-)
spen LOC106566857 other upstream 1020920 52379551 ~ 52428869 (-)
LOC110492250 LOC106566852 other upstream 1173754 52566433 ~ 52577143 (-)
G1388236 NA other upstream 1633976 53031932 ~ 53032921 (-)
LOC110492299 LOC106566805 other upstream 2332381 53730164 ~ 53757019 (-)

Expression



Co-expression Network