XLOC_032882 (stk25a)


Basic Information

Item Value
gene id XLOC_032882
gene name stk25a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 27041594 ~ 27057702 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00063900
AAAGTAGTGAGGTTGTAGAGGGAGTCTCCTATGCAGAACATAAAGCGTGAACATTCAGACGAAAGACCGCTTGTCTGCGCTACTGGATGGACAGGGATACACATTACACTTTTGTAAAATGAACAGCGGGTCTGTCTGATCTACTGGAATGATTTAGACAGCGAAGGACTGGGAACAAGCTGTTCCTTTGGTAGGAGACAGACTGAGCAAGAAAGAGAGCCAGAGGAAAATCTGTGAACCCCGAAGCTGGTACATCCAGCAGGATATGGCTCACCTCCAGAACATTCGCAACCAGAACTCACGTTTAAATCCTGAGGAATACTTCACCAAATTGGAGCGCATCGGTAAAGGCTCTTTTGGAGAGGTTTATAAGGGCATAAACAACCGCACCAAAGAGGTTGTTGCCATTAAGATCATTGACTTGGAAGAAGCAGAAGATGAGATTGAAGACATCCAGCAGGAGATCACAGTGCTCAGCCAGTGCGACAGCCCTTATGTCACCAAATACTATGGATCCTATCTGACGGGTTCTAAACTATGGATCATCATGGAATATCTGGGAGGTGGATCCGCTCTGGATCTGCTCAGACCTGGAACTTTGGAAGAGGTGTATATTGCCACCATCCTCAGAGAAATACTAAAAGGACTCGACTACCTGCACTCAGAGAGGAAGATTCACAGAGACATCAAAGCGGCCAATGTGTTACTCTCTGAGCATGGAGAAGTCAAGCTGGCAGACTTTGGAGTGGCCGGTCAGTTAACAGACACGCAGATcaagagaaacacttttgtagGGACTCCATTCTGGATGGCACCAGAGGTCATCAAACAGTCCGCTTATGACTTCAAGGCTGACATCTGGTCATTGGGCATCACTGCCATCGAGCTGGCTAAGGGAGAACCACCAAATGCTGAACTTCACCCCATGAGGGTCCTGTTCCTCATCCCCAAAAATAACCCCCCCACGCTGGAGGGCTCCTACAGCAAAGCCTTTAAGGACTTTGTTGAAGCTTGTCTCAATAAAGAGCCACGATTTAGACCGACAGCCAAAGAGCTGCTGAAACATAAGTTCATCACCCGCTACACCAAGAAGACGTCTTACCTGTCGGAGCTGATAGATCGATACCGCCGCTGGAAGTCAGAGGGCCATGGGGAGGAGTCTAGCTCTGATGACTCTGACATGGATGGAGAAGGGGATGACCGGGACCAGGGGCCCATGTGGACTTTCCCCACTGTTCGGCCCTCTACCATCAACAAGCTAAACAGAGGCCTCAGCCATTTAGACAACAAGACATCAGATGTTATGAAAAGGCAACCAAAGTCATCATCTCTGACATCGTTCATCACACCAATCTTCAAAGAGTTGAAGGAGAAGCGGCGTGTCGGTGGGAATGGTGTTTGTGCTGTGGAGGAGCTGGAAAACGCCTTCAGCCTAGCAGAAGAGTCCAGTCCCGGAATCTCTGACCGGCTGCTCAATCACGTCATGGAGAGAGTCTGCAGCTTTTCAGGTCATGCAGATTCTATGCTGTAGGATGTTGAACTGCATGCTGCCCTGAATCCTGCGCTGGAGTGAACTTTGGAGACTTGTGTGTCCCAATCCTGCAGGTTTACGCTCAACGGAAACAGCTTACCTTTAAAACGCTGAGGTTTCTCTGACCAGCCTGATGGACAGACTCTCCTGATGCCCTCGTGAGCTGGTCCTCAGCGCCCACCAGCTGAAGACCAACCAGTCTGTCCATCACCGCTTGTATGATGAGATGAGTTTACAAGTTTTCTTTGTAGAATTttcaatgaaatgtaaaatatgaaactgaaatgtaaaatacaatatgatgccaatgaaatgtaaaatataaatcgTATGTGCATTTGGTTAAATGACAGTGCATTTaactataaattaaataaactaatgaacaaag
>TCONS_00063901
GGAGTCTAGCTCTGATGACTCTGACATGGATGGAGAAGGGGATGACCGGGACCAGGGGCCCATGTGGACTTTCCCCACTGTTCGGCCCTCTACCATCAACAAGCTAAACAGAGGCCTCAGCCATTTAGACAACAAGACATCAGATGTTATGAAAAGGCAACCAAAGTCATCATCTCTGACATCGTTCATCACACCAATCTTCAAAGAGTTGAAGGAGAAGCGGCGTGTCGGTGGGAATGGTGTTTGTGCTGTGGAGGAGCTGGAAAACGCCTTCAGCCTAGCAGAAGAGTCCAGTCCCGGAATCTCTGACCGGCTGCTCAATCACGTCATGGAGAGAGTCTGCAGGTTTACGCTCAACGGAAACAGCTTACCTTTAAAACGCTGAGGTTTCTCTGACCAGCCTGATGGACAGACTCTCCTGATGCCCTCGTGAGCTGGTCCTCAGCGCCCACCAGCTGAAGACCAACCAGTCTGTCCATCACCGCTTGTATGATGAGATGAGTTTACAA
>TCONS_00065159
AGTTTGattcttgtttttgttgtgttcaaCAAGGAAACAGATGCTCGATGTGTTCTCCTTGagtcaaaaaatgaaaaaattgcttaaaaaacTGCACAGGATTTCTGATGGTTCAATCTATAGATACTCTTCTTCTTCAGATCTGTATTCCAGCGATGATTGGAACTCACGTTTAAATCCTGAGGAATACTTCACCAAATTGGAGCGCATCGGTAAAGGCTCTTTTGGAGAGGTTTATAAGGGCATAAACAACCGCACCAAAGAGGTTGTTGCCATTAAGATCATTGACTTGGAAGAAGCAGAAGATGAGATTGAAGACATCCAGCAGGAGATCACAGTGCTCAGCCAGTGCGACAGCCCTTATGTCACCAAATACTATGGATCCTATCTGACGGGTTCTAAACTATGGATCATCATGGAATATCTGGGAGGTGGATCCGCTCTGGATCTGCTCAGACCTGGAACTTTGGAAGAGGTGTATATTGCCACCATCCTCAGAGAAATACTAAAAGGACTCGACTACCTGCACTCAGAGAGGAAGATTCACAGAGACATCAAAGCGGCCAATGTGTTACTCTCTGAGCATGGAGAAGTCAAGCTGGCAGACTTTGGAGTGGCCGGTCAGTTAACAGACACGCAGATcaagagaaacacttttgtagGGACTCCATTCTGGATGGCACCAGAGGTCATCAAACAGTCCGCTTATGACTTCAAGGCTGACATCTGGTCATTGGGCATCACTGCCATCGAGCTGGCTAAGGGAGAACCACCAAATGCTGAACTTCACCCCATGAGGGTCCTGTTCCTCATCCCCAAAAATAACCCCCCCACGCTGGAGGGCTCCTACAGCAAAGCCTTTAAGGACTTTGTTGAAGCTTGTCTCAATAAAGAGCCACGATTTAGACCGACAGCCAAAGAGCTGCTGAAACATAAGTTCATCACCCGCTACACCAAGAAGACGTCTTACCTGTCGGAGCTGATAGATCGATACCGCCGCTGGAAGTCAGAGGGCCATGGGGAGGAGTCTAGCTCTGATGACTCTGACATGGATGGAGAAGGGGATGACCGGGACCAGGGGCCCATGTGGACTTTCCCCACTGTTCGGCCCTCTACCATCAACAAGCTAAACAGAGGCCTCAGCCATTTAGACAACAAGACATCAGATGTTATGAAAAGGCAACCAAAGTCATCATCTCTGACATCGTTCATCACACCAATCTTCAAAGAGTTGAAGGAGAAGCGGCGTGTCGGTGGGAATGGTGTTTGTGCTGTGGAGGAGCTGGAAAACGCCTTCAGCCTAGCAGAAGAGTCCAGTCCCGGAATCTCTGACCGGCTGCTCAATCACGTCATGGAGAGAGTCTGCAGGTTTACGCTCAACGGAAACAGCTTACCTTTAAAACGCTGAGGTTTCTCTGACCAGCCTGATGGACAGACTCTCCTGATGCCCTCGTGAGCTGGTCCTCAGCGCCCACCAGCTGAAGACCAACCAGTCTGTCCATCACCGCTTGTATGATGAGATGAGTTTACAA
>TCONS_00063902
ACTCAGAGAGGAAGATTCACAGAGACATCAAAGCGGCCAATGTGTTACTCTCTGAGCATGGAGAAGTCAAGCTGGCAGACTTTGGAGTGGCCGGTCAGTTAACAGACACGCAGATcaagagaaacacttttgtagGGACTCCATTCTGGATGGCACCAGAGGTCATCAAACAGTCCGCTTATGACTTCAAGGCTGACATCTGGTCATTGGGCATCACTGCCATCGAGCTGGCTAAGGGAGAACCACCAAATGCTGAACTTCACCCCATGAGGGTCCTGTTCCTCATCCCCAAAAATAACCCCCCCACGCTGGAGGGCTCCTACAGCAAAGCCTTTAAGGACTTTGTTGAAGCTTGTCTCAATAAAGAGCCACGATTTAGACCGACAGCCAAAGAGCTGCTGAAACATAAGTTCATCACCCGCTACACCAAGAAGACGTCTTACCTGTCGGAGCTGATAGATCGATACCGCCGCTGGAAGTCAGAGGGCCATGGGGAGGAGTCTAGCTCTGATGACTCTGACATGGATGGAGAAGGGGATGACCGGGACCAGGGGCCCATGTGGACTTTCCCCACTGTTCGGCCCTCTACCATCAACAAGCTAAACAGAGGCCTCAGCCATTTAGACAACAAGGTAAAAATATGTTCAGATGTAGATTaatattac
>TCONS_00063903
AGTTTGattcttgtttttgttgtgttcaaCAAGGAAACAGATGCTCGATGTGTTCTCCTTGagtcaaaaaatgaaaaaattgcttaaaaaacTGCACAGGATTTCTGATGGTTCAATCTATAGATACTCTTCTTCTTCAGATCTGTATTCCAGCGATGATTGGAACTCACGTTTAAATCCTGAGGAATACTTCACCAAATTGGAGCGCATCGGTAAAGGCTCTTTTGGAGAGGTTTATAAGGGCATAAACAACCGCACCAAAGAGGTTGTTGCCATTAAGATCATTGACTTGGAAGAAGCAGAAGATGAGATTGAAGACATCCAGCAGGAGATCACAGTGCTCAGCCAGTGCGACAGCCCTTATGTCACCAAATACTATGGATCCTATCTGACGGGTTCTAAACTATGGATCATCATGGAATATCTGGGAGGTGGATCCGCTCTGGATCTGCTCAGACCTGGAACTTTGGAAGAGGTGTATATTGCCACCATCCTCAGAGAAATACTAAAAGGACTCGACTACCTGCACTCAGAGAGGAAGATTCACAGAGACATCAAAGCGGCCAATGTGTTACTCTCTGAGCATGGAGAAGTCAAGCTGGCAGACTTTGGAGTGGCCGGTCAGTTAACAGACACGCAGATcaagagaaacacttttgtagGGACTCCATTCTGGATGGCACCAGAGGTCATCAAACAGTCCGCTTATGACTTCAAGGCTGACATCTGGTCATTGGGCATCACTGCCATCGAGCTGGCTAAGGGAGAACCACCAAATGCTGAACTTCACCCCATGAGGGTCCTGTTCCTCATCCCCAAAAATAACCCCCCCACGCTGGAGGGCTCCTACAGCAAAGCCTTTAAGGACTTTGTTGAAGCTTGTCTC

Function

symbol description
stk25a Predicted to enable ATP binding activity and protein kinase activity. Acts upstream of or within axis elongation and heart development. Is expressed in cranial ganglion and pharyngeal arch. Orthologous to human STK25 (serine/threonine kinase 25).

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0003401 axis elongation biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041010-92 Predicted to enable ATP binding activity and protein kinase activity. Acts upstream of or within axis elongation and heart development. Is expressed in cranial ganglion and pharyngeal arch. Orthologous to human STK25 (serine/threonine kinase 25).

Ensembl:

ensembl_id ENSDARG00000002210

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00063900 False 1922 mRNA 0.47 11 27041594 27057702
TCONS_00063901 False 509 processed_transcript 0.52 5 27041747 27048982
TCONS_00065159 False 1532 lncRNA 0.48 11 27041747 27055863
TCONS_00063902 False 665 lncRNA 0.50 5 27048723 27053505
TCONS_00063903 True 886 processed_transcript 0.45 6 27051342 27055863

Neighbor

gene id symbol gene type direction distance location
XLOC_032881 NA coding downstream 3223 27035652 ~ 27038371 (-)
XLOC_032880 hdlbpa coding downstream 145844 26874839 ~ 26895750 (-)
XLOC_032879 NA coding downstream 215670 26824950 ~ 26825924 (-)
XLOC_032878 NA coding downstream 366651 26561981 ~ 26674943 (-)
XLOC_032877 sox14 coding downstream 481673 26557979 ~ 26559921 (-)
XLOC_032883 dtymk coding upstream 47260 27104962 ~ 27108844 (-)
XLOC_032884 agxta coding upstream 55182 27112884 ~ 27123327 (-)
XLOC_032885 zgc:103559 coding upstream 68918 27126620 ~ 27139396 (-)
XLOC_032886 NA coding upstream 433035 27490737 ~ 27491747 (-)
XLOC_032887 NA coding upstream 562973 27620675 ~ 27623521 (-)
XLOC_032876 NA non-coding downstream 731747 26290783 ~ 26309847 (-)
XLOC_032872 NA non-coding downstream 1773286 25267951 ~ 25268308 (-)
XLOC_032890 NA non-coding upstream 880787 27938489 ~ 27954601 (-)
XLOC_032892 NA non-coding upstream 1066679 28124381 ~ 28130130 (-)
XLOC_032898 NA non-coding upstream 1926315 28984017 ~ 28986397 (-)

Expression


Co-expression Network