Gene
RNA
| Item | Value |
|---|---|
| gene id | G1386287 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 51516635 ~ 51521317 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1583255 | True | 2135 | lncRNA | 0.36 | 2 | 51516635 | 51521317 |
51,516,000
51,517,000
51,518,000
51,519,000
51,520,000
51,521,000
51,522,000
51,523,000
51,524,000
51,525,000
51,526,000
51,527,000
51,528,000
51,529,000
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dffb | LOC106566885 | coding | downstream | 398785 | 51113403 ~ 51117850 (-) |
| LOC110492214 | LOC106566770 | coding | downstream | 412702 | 51101783 ~ 51103933 (-) |
| LOC110491090 | fam57b | coding | downstream | 439276 | 51076778 ~ 51077359 (-) |
| LOC110491089 | lrrc47 | coding | downstream | 472841 | 51041123 ~ 51043794 (-) |
| mad2l2 | mad2l2 | coding | downstream | 484716 | 51021456 ~ 51031919 (-) |
| LOC110492220 | LOC106566883 | coding | upstream | 1032 | 51522349 ~ 51603970 (-) |
| LOC110491091 | LOC106566924 | coding | upstream | 169566 | 51690883 ~ 51717957 (-) |
| LOC110492221 | LOC106566882 | coding | upstream | 200653 | 51721970 ~ 51738292 (-) |
| LOC110492226 | LOC106572002 | coding | upstream | 459297 | 51978399 ~ 51990025 (-) |
| LOC110492229 | LOC106566874 | coding | upstream | 477241 | 51998558 ~ 52069366 (-) |
| G1386218 | NA | non-coding | downstream | 6665 | 51509743 ~ 51509970 (-) |
| G1386166 | NA | non-coding | downstream | 51043 | 51465388 ~ 51465592 (-) |
| G1386157 | NA | non-coding | downstream | 57685 | 51458742 ~ 51458950 (-) |
| G1386146 | NA | non-coding | downstream | 65893 | 51450502 ~ 51450742 (-) |
| G1386144 | NA | non-coding | downstream | 66970 | 51449437 ~ 51449665 (-) |
| G1386293 | NA | non-coding | upstream | 13318 | 51534635 ~ 51534841 (-) |
| G1386295 | NA | non-coding | upstream | 15519 | 51536836 ~ 51537047 (-) |
| G1386301 | NA | non-coding | upstream | 19909 | 51541226 ~ 51541480 (-) |
| G1386304 | NA | non-coding | upstream | 22323 | 51543640 ~ 51543939 (-) |
| G1386307 | NA | non-coding | upstream | 27978 | 51549295 ~ 51549645 (-) |
| G1385888 | NA | other | downstream | 387987 | 51090645 ~ 51128648 (-) |
| G1385645 | NA | other | downstream | 460574 | 51055631 ~ 51056061 (-) |
| G1384875 | NA | other | downstream | 1450818 | 50064821 ~ 50065817 (-) |
| LOC110491086 | LOC106566907 | other | downstream | 1797096 | 49576512 ~ 49719539 (-) |
| spen | LOC106566857 | other | upstream | 897559 | 52379551 ~ 52428869 (-) |
| LOC110492250 | LOC106566852 | other | upstream | 1050393 | 52566433 ~ 52577143 (-) |
| G1388236 | NA | other | upstream | 1510615 | 53031932 ~ 53032921 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 2209020 | 53730164 ~ 53757019 (-) |
