G1386295



Basic Information


Item Value
gene id G1386295
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 51536836 ~ 51537047 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1583263
CATCAATATCAAGCCAGATAATTGAGTGGGGAGGATATGTGAGGTATTTCGTTTGAATACATCCACCCATAGAACTCTCTCTTCTAAAGTCCCACTTATTGGTGGCAATCCACTTTCTGTTAATTTTTTTGAtttctttcacctttatttaaccaggtaggccagttgagaacaagttctcatttacaactgcgacatggccaagataaagc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1583263 True 212 lncRNA 0.39 1 51536836 51537047

Neighbor


gene id symbol gene type direction distance location
dffb LOC106566885 coding downstream 418986 51113403 ~ 51117850 (-)
LOC110492214 LOC106566770 coding downstream 432903 51101783 ~ 51103933 (-)
LOC110491090 fam57b coding downstream 459477 51076778 ~ 51077359 (-)
LOC110491089 lrrc47 coding downstream 493042 51041123 ~ 51043794 (-)
mad2l2 mad2l2 coding downstream 504917 51021456 ~ 51031919 (-)
LOC110491091 LOC106566924 coding upstream 153836 51690883 ~ 51717957 (-)
LOC110492221 LOC106566882 coding upstream 184923 51721970 ~ 51738292 (-)
LOC110492226 LOC106572002 coding upstream 443567 51978399 ~ 51990025 (-)
LOC110492229 LOC106566874 coding upstream 461511 51998558 ~ 52069366 (-)
LOC110492230 NA coding upstream 536693 52073740 ~ 52077554 (-)
G1386293 NA non-coding downstream 1995 51534635 ~ 51534841 (-)
G1386287 NA non-coding downstream 15519 51516635 ~ 51521317 (-)
G1386218 NA non-coding downstream 26866 51509743 ~ 51509970 (-)
G1386166 NA non-coding downstream 71244 51465388 ~ 51465592 (-)
G1386157 NA non-coding downstream 77886 51458742 ~ 51458950 (-)
G1386301 NA non-coding upstream 4179 51541226 ~ 51541480 (-)
G1386304 NA non-coding upstream 6593 51543640 ~ 51543939 (-)
G1386307 NA non-coding upstream 12248 51549295 ~ 51549645 (-)
G1386308 NA non-coding upstream 13009 51550056 ~ 51550260 (-)
G1386314 NA non-coding upstream 18910 51555957 ~ 51556356 (-)
G1385888 NA other downstream 408188 51090645 ~ 51128648 (-)
G1385645 NA other downstream 480775 51055631 ~ 51056061 (-)
G1384875 NA other downstream 1471019 50064821 ~ 50065817 (-)
LOC110491086 LOC106566907 other downstream 1817297 49576512 ~ 49719539 (-)
spen LOC106566857 other upstream 881829 52379551 ~ 52428869 (-)
LOC110492250 LOC106566852 other upstream 1034663 52566433 ~ 52577143 (-)
G1388236 NA other upstream 1494885 53031932 ~ 53032921 (-)
LOC110492299 LOC106566805 other upstream 2193290 53730164 ~ 53757019 (-)

Expression



Co-expression Network