XLOC_032886



Basic Information


Item Value
gene id XLOC_032886
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 27490737 ~ 27491747 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00065160
GCAGTTTAATTCAAGAGGCTGTAAGTGAAATACAGGGGATATATTTCCAGTTCAAAGGTGTAATCTGTGACGCTGCTGTTGAGAACGGCCGTGCGAGATCCACTACCATCAGCTGGCACCAGAGACACTCGAACCTGACTGATCGCAGCATGACGTCCAACATGCACCAACCACCGCAGCCAAACCTGAGAGGACGACACGTTCACTACCTCCAGCTGATCCACCTGACGAGGCC
>TCONS_00065161
gcgactcgagccagcaaccttcttgctgtgagGTGTAATCTGTGACGCTGCTGTTGAGAACGGCCGTGCGAGATCCACTACCATCAGCTGGCACCAGAGACACTCGAACCTGACTGATCGCAGCATGACGTCCAACATGCACCAACCACCGCAGCCAAACCTGAGAGGACGACACGTTCACTACCTCCAGCTGATCCACCTGACGAGGCC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00065160 False 235 lncRNA 0.52 2 27490737 27491611
TCONS_00065161 True 210 lncRNA 0.58 2 27490737 27491747

Neighbor


gene id symbol gene type direction distance location
XLOC_032885 zgc:103559 coding downstream 351341 27126620 ~ 27139396 (-)
XLOC_032884 agxta coding downstream 367410 27112884 ~ 27123327 (-)
XLOC_032883 dtymk coding downstream 381893 27104962 ~ 27108844 (-)
XLOC_032882 stk25a coding downstream 433035 27041594 ~ 27057702 (-)
XLOC_032881 NA coding downstream 452366 27035652 ~ 27038371 (-)
XLOC_032887 NA coding upstream 128928 27620675 ~ 27623521 (-)
XLOC_032888 AL935299.1 coding upstream 204576 27696323 ~ 27727397 (-)
XLOC_032889 im:7152348 coding upstream 392625 27884372 ~ 27891961 (-)
XLOC_032890 NA coding upstream 446742 27938489 ~ 27954601 (-)
XLOC_032891 si:ch73-194h10.3 coding upstream 623636 28115383 ~ 28117995 (-)
XLOC_032879 NA non-coding downstream 664813 26824950 ~ 26825924 (-)
XLOC_032878 NA non-coding downstream 815794 26561981 ~ 26674943 (-)
XLOC_032876 NA non-coding downstream 1180890 26290783 ~ 26309847 (-)
XLOC_032872 NA non-coding downstream 2222429 25267951 ~ 25268308 (-)
XLOC_032892 NA non-coding upstream 632634 28124381 ~ 28130130 (-)
XLOC_032898 NA non-coding upstream 1492270 28984017 ~ 28986397 (-)
XLOC_032908 NA non-coding upstream 1918479 29410226 ~ 29411285 (-)

Expression



Co-expression Network