Gene
RNA
| Item | Value |
|---|---|
| gene id | G1386368 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 51625317 ~ 51625782 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1583337 | True | 466 | lncRNA | 0.44 | 1 | 51625317 | 51625782 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492220 | LOC106566883 | coding | downstream | 21347 | 51522349 ~ 51603970 (-) |
| dffb | LOC106566885 | coding | downstream | 507467 | 51113403 ~ 51117850 (-) |
| LOC110492214 | LOC106566770 | coding | downstream | 521384 | 51101783 ~ 51103933 (-) |
| LOC110491090 | fam57b | coding | downstream | 547958 | 51076778 ~ 51077359 (-) |
| LOC110491089 | lrrc47 | coding | downstream | 581523 | 51041123 ~ 51043794 (-) |
| LOC110491091 | LOC106566924 | coding | upstream | 65101 | 51690883 ~ 51717957 (-) |
| LOC110492221 | LOC106566882 | coding | upstream | 96188 | 51721970 ~ 51738292 (-) |
| LOC110492226 | LOC106572002 | coding | upstream | 354832 | 51978399 ~ 51990025 (-) |
| LOC110492229 | LOC106566874 | coding | upstream | 372776 | 51998558 ~ 52069366 (-) |
| LOC110492230 | NA | coding | upstream | 447958 | 52073740 ~ 52077554 (-) |
| G1386336 | NA | non-coding | downstream | 30577 | 51594529 ~ 51594740 (-) |
| G1386329 | NA | non-coding | downstream | 41847 | 51583200 ~ 51583470 (-) |
| G1386328 | NA | non-coding | downstream | 42986 | 51582117 ~ 51582331 (-) |
| G1386327 | NA | non-coding | downstream | 44063 | 51581035 ~ 51581254 (-) |
| G1386315 | NA | non-coding | downstream | 66404 | 51558641 ~ 51558913 (-) |
| G1386646 | NA | non-coding | upstream | 31675 | 51657457 ~ 51657722 (-) |
| G1386650 | NA | non-coding | upstream | 35280 | 51661062 ~ 51661277 (-) |
| G1386667 | NA | non-coding | upstream | 57581 | 51683363 ~ 51683566 (-) |
| G1386668 | NA | non-coding | upstream | 57935 | 51683717 ~ 51683923 (-) |
| G1386669 | NA | non-coding | upstream | 58787 | 51684569 ~ 51684785 (-) |
| G1385888 | NA | other | downstream | 496669 | 51090645 ~ 51128648 (-) |
| G1385645 | NA | other | downstream | 569256 | 51055631 ~ 51056061 (-) |
| G1384875 | NA | other | downstream | 1559500 | 50064821 ~ 50065817 (-) |
| LOC110491086 | LOC106566907 | other | downstream | 1905778 | 49576512 ~ 49719539 (-) |
| spen | LOC106566857 | other | upstream | 793094 | 52379551 ~ 52428869 (-) |
| LOC110492250 | LOC106566852 | other | upstream | 945928 | 52566433 ~ 52577143 (-) |
| G1388236 | NA | other | upstream | 1406150 | 53031932 ~ 53032921 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 2104555 | 53730164 ~ 53757019 (-) |
