Gene
RNA
| Item | Value |
|---|---|
| gene id | G1386674 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 51689406 ~ 51689741 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1583682 | True | 336 | lncRNA | 0.44 | 1 | 51689406 | 51689741 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492220 | LOC106566883 | coding | downstream | 85436 | 51522349 ~ 51603970 (-) |
| dffb | LOC106566885 | coding | downstream | 571556 | 51113403 ~ 51117850 (-) |
| LOC110492214 | LOC106566770 | coding | downstream | 585473 | 51101783 ~ 51103933 (-) |
| LOC110491090 | fam57b | coding | downstream | 612047 | 51076778 ~ 51077359 (-) |
| LOC110491089 | lrrc47 | coding | downstream | 645612 | 51041123 ~ 51043794 (-) |
| LOC110491091 | LOC106566924 | coding | upstream | 1142 | 51690883 ~ 51717957 (-) |
| LOC110492221 | LOC106566882 | coding | upstream | 32229 | 51721970 ~ 51738292 (-) |
| LOC110492226 | LOC106572002 | coding | upstream | 290873 | 51978399 ~ 51990025 (-) |
| LOC110492229 | LOC106566874 | coding | upstream | 308817 | 51998558 ~ 52069366 (-) |
| LOC110492230 | NA | coding | upstream | 383999 | 52073740 ~ 52077554 (-) |
| G1386669 | NA | non-coding | downstream | 4621 | 51684569 ~ 51684785 (-) |
| G1386668 | NA | non-coding | downstream | 5483 | 51683717 ~ 51683923 (-) |
| G1386667 | NA | non-coding | downstream | 5840 | 51683363 ~ 51683566 (-) |
| G1386650 | NA | non-coding | downstream | 28129 | 51661062 ~ 51661277 (-) |
| G1386646 | NA | non-coding | downstream | 31684 | 51657457 ~ 51657722 (-) |
| G1386681 | NA | non-coding | upstream | 7464 | 51697205 ~ 51697466 (-) |
| G1386716 | gnb2 | non-coding | upstream | 160074 | 51849815 ~ 51852787 (-) |
| G1386713 | NA | non-coding | upstream | 170588 | 51860329 ~ 51862186 (-) |
| G1386781 | NA | non-coding | upstream | 180950 | 51870691 ~ 51871007 (-) |
| G1386782 | NA | non-coding | upstream | 182149 | 51871890 ~ 51872097 (-) |
| G1385888 | NA | other | downstream | 560758 | 51090645 ~ 51128648 (-) |
| G1385645 | NA | other | downstream | 633345 | 51055631 ~ 51056061 (-) |
| G1384875 | NA | other | downstream | 1623589 | 50064821 ~ 50065817 (-) |
| LOC110491086 | LOC106566907 | other | downstream | 1969867 | 49576512 ~ 49719539 (-) |
| spen | LOC106566857 | other | upstream | 729135 | 52379551 ~ 52428869 (-) |
| LOC110492250 | LOC106566852 | other | upstream | 881969 | 52566433 ~ 52577143 (-) |
| G1388236 | NA | other | upstream | 1342191 | 53031932 ~ 53032921 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 2040596 | 53730164 ~ 53757019 (-) |
