G1386713


Basic Information

Item Value
gene id G1386713
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 51860329 ~ 51862186 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1583732
CTGCTTTTTATTTCATCTTAAATAACAGTACATTTTAATATAGTTTCTATCTTGCAGCCAGCTTTCGGTTGTACACTGACTGACTTTAAATTTAAATACAAAAGGTGAGAAGGGAACAGCTGGGTGCAGAGATCTACAGTTATTTCATGGCAAGAAAAGGAAAAGGAATTTTATTTAATATTTCTGTATTGATTTTCTTTGTTGCCAACTCCAGGCCTAACGCACAAATACAGCACATTTTTGTACAGAATTTTGCAAAGAAAAAACagaatggggggaaaaaaatgccACTACTGCTAAAGAAAGTGTTTACACAAGGAGGGGAACAGAAAATTCTGTCATTCAAATGCtgcaagttttttattttttattattaaaggaCAGAAAAAACATCAAAAGGACTTAGTTCTATATGCACCTCTTTTTAAGCAATTCTACAGCATGCGATTCTAAGAGTTAACCCACCCATGGCAGAAagccaaaatattttttattttattttttaacttaaaAAGCTTCATTATCATTATTTTCAAACATTGATTTATACAACATGTCATTCACAGAGTAGTTACTGCATTTCCAAGCACGGAATGGGCACCTCTGTTGAATGAAACCGGGGTAATAAGTAGAGGCCTCCCTACCCAACGAAATCACTTCTCCGGTCGCAACCACGGTCATCAAAAGGgtaacaaaacagaaataaaacGAAGAAAGTGAACCAATGGGTTAATCTTCATTTAATTATTCTACATTGTCGCCCAACAAAAGGTGAAGAGAATGGTTAAAATGTTGTTTGTTTTCATTTTGAAAATGAGCATTCATTATCATAAACAGAATATGCTTGGTTAGTTAACTTTTCTTGAAACATTATTCTATACATGCAAAGTTTAAATTTGTGCAAACAAACATGTGACTaaacagaaaaaaataaacaaatagtgAAGTATCTTGGGACTAAATATACAGAATGGCCAGATCCTCCTGTTGGTGGCTCATGGACTCGACTCCCTGCTGAAGCTCAATTCTCTTGCCTTTTTTTCTGATGTGATTAAGATGACGATAATTTGTCATTTTTATTTCCAACCTACAAAACTTGACTCTAAACTATATCAAGACTGATAAAACAAAGCTCTCAATCCTCATTTTACCAACAGGTCACTGATCTAGTTCCCTGAACCAAAAATAAAGGTGGGGGAAAAAATAAACATGACCAAAAAGCTATCAAGAGTTAAATCACCGTTGTGTAGATTACCTTCACTCAAACCTGTGTATTGAAGATGGATTACACATTTGCATGGGGGTGAATGTATTTTCTTATGACACAATATCAGAAAATGGTCCCAGGAGGAATGCACAATTCTCTCCCCCATTCTATTCCACTGAAATTCCTCATCTTTTTAGCTGAGTGAAACAATTGTGCTCTTCTTTTAAATAAGGAGAGAATTTTTCCCTTGGTAGTTTTTGGGGGTTGGAGTCAGTTTCATGGTTTTGAGAAGATTGGATATGCAATaaaattgaacattttggaaTAGTCTTCCACTGAACTTCGGAGTCCA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1583732 True 1559 lncRNA 0.35 2 51860329 51862186

Neighbor

gene id symbol gene type direction distance location
LOC110492221 LOC106566882 coding downstream 122037 51721970 ~ 51738292 (-)
LOC110491091 LOC106566924 coding downstream 142372 51690883 ~ 51717957 (-)
LOC110492220 LOC106566883 coding downstream 256359 51522349 ~ 51603970 (-)
dffb LOC106566885 coding downstream 742479 51113403 ~ 51117850 (-)
LOC110492214 LOC106566770 coding downstream 756396 51101783 ~ 51103933 (-)
LOC110492226 LOC106572002 coding upstream 118428 51978399 ~ 51990025 (-)
LOC110492229 LOC106566874 coding upstream 136372 51998558 ~ 52069366 (-)
LOC110492230 NA coding upstream 211554 52073740 ~ 52077554 (-)
LOC110492234 LOC106566870 coding upstream 306629 52168815 ~ 52206285 (-)
plekhm2 LOC106566865 coding upstream 379412 52241598 ~ 52267535 (-)
G1386716 gnb2 non-coding downstream 7542 51849815 ~ 51852787 (-)
G1386681 NA non-coding downstream 162863 51697205 ~ 51697466 (-)
G1386674 NA non-coding downstream 170588 51689406 ~ 51689741 (-)
G1386669 NA non-coding downstream 175544 51684569 ~ 51684785 (-)
G1386668 NA non-coding downstream 176406 51683717 ~ 51683923 (-)
G1386781 NA non-coding upstream 8505 51870691 ~ 51871007 (-)
G1386782 NA non-coding upstream 9704 51871890 ~ 51872097 (-)
G1386784 NA non-coding upstream 11775 51873961 ~ 51874371 (-)
G1386762 NA non-coding upstream 50966 51913152 ~ 51915899 (-)
G1386804 NA non-coding upstream 55763 51917949 ~ 51918161 (-)
G1385888 NA other downstream 731681 51090645 ~ 51128648 (-)
G1385645 NA other downstream 804268 51055631 ~ 51056061 (-)
G1384875 NA other downstream 1794512 50064821 ~ 50065817 (-)
LOC110491086 LOC106566907 other downstream 2140790 49576512 ~ 49719539 (-)
spen LOC106566857 other upstream 556690 52379551 ~ 52428869 (-)
LOC110492250 LOC106566852 other upstream 709524 52566433 ~ 52577143 (-)
G1388236 NA other upstream 1169746 53031932 ~ 53032921 (-)
LOC110492299 LOC106566805 other upstream 1868151 53730164 ~ 53757019 (-)

Expression


Co-expression Network