G1386762


Basic Information

Item Value
gene id G1386762
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 51913152 ~ 51915899 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1583781
CGACAATTCATTGGCTCTCTGTTTATTAAAGTGCTCTGGAAAAATAGCAGAATTCATTTCAGAAACAATATTTACAAAACGTACCATTACAAAAGAGTTATAGGACCACAGAGATGTAGAAGTCTACAAAACAAAGTGAGAAGCACTTGAAGATTAGACTTGACATAGAAAGCATCATAGGAATAAGGTCCTTCATCCAAAAGGAACCATAAAGGTATCACATTGGGGAAGCTTAAATGATTTCAGTGTAAAAATCTTGGTTCTTTCGTTATCTATCGGCTGGTTTGTAAGGCAAAGTCCACGACTGCCATTACTTCAGTAGAGGATACACTGTACTAACTGAAAAACGAGAAGTATAGTAGCAAATAAAGACAAACACATTTCTTTCAAATGTTTGCTCTTATAAAACGATATCCCCTAACAACTGAAGGGACTGTCATTCAATCTTGATGAACAGACTCCACTCCAAACTCAATTGTTAGAGGAAATTAATATTTTTCTACTTTAAGAGAATAGATTGTGAAACTAACCTGCACTGAAGCCTTAAGACGATATCAATATAGAAAAAGTACCAAAGAGATTTATATTTCAGCAATGATACAGTGCAAACTGGTTAATAAACATATAGGCTATATAAAAAAACATCTTATTGAAGCATCATAAATGAGAAAATAAAGGAATGATTGATTGACTAGTTAAGAGTGAGCTGGTCCTCTTGCAGAGTGTGGTGCACTGGTATCCAGAGCTTAAACCACTTTTTCCATTGGGGAAAACGTCACTTGCCCATCGAACAAGTACATTTAACACGCAAATTCATAATGTATTAAATTCATATAAACTATAATTAGTTGTCTCTAAAATGAACATCTATCTGATAgttaaatattatattataactCCTTGATAAAAATGTTATATGAAAAACATGTCAATTGTATCACATCGTATCTTTTACCACCCCCCGAAAAGCCAATTAGGAAAGAAGAAAAACCCTCAAACCATCATATCATATTTTATTATATTATCAAGTCGATATTTCAGAGCTGGTCCGTCAGAGGGGGTGAGAATTATTCTCATTTGGTACGGTAGGCCAACACCTACAACTGGTATAGGAATGCCTTCAATCTCTCATCATACTGCAATAAGTCTGACACCATAGGTCAGGGGCggacaaccctgTAGAATCACAACTCCCTTCGTTGTGAACAACGGAATTACCTTGAAATGAATGACATAGTAGATCTATGGCTTTACAGTGAAAGGCAATGAATACAATCAAGTTGTGGTCTCATCTCACCTGGAATGGACTTTAGTTCTTAACGTTTGTTCCATACTGTTCTGGCATTTTACATGGTCAGACACTACAACGTTGTTGTAGACAGAGTAGTTAACGTAAGATGAACATGTACTGAAGCTTCTCAAATGGCTTGCACTGCAGACAAACTGCAGAGAGAGGAATACTGAAGATATGATTATGCTACACTTGCACTAAGCTGTAAATACGATTAAGAAAATTAAAGTTATGTAAACCTTAATAAGCAATTATCTATGTAATAGTTATGAGTTGAAGGCACAATCTACACATTTAGTTCATTATTGCAGAGTAGACGCAATTATTCTGCTTTTCCTgaagtagtaataataataataataatacctaaTTTTCTGTTAGGGATTGtataaaaaacaaatacatttaattcCTTATCTCCATTATCTCCAAGAACATTGGTTCTTGATGAACAACCCCACTGACAATAGTCACGACATCTGTTTTCTATGTTGAGGATCTTGGCAGCCCCTTAGCATTCACGTCGCTCAAGCTAAACAAAACAACGTTCATGGTTTAAGAGGAGCCGAGGTTTGTCCCTGATAGCCTGTAAGACGCCACGAAACAATAGACAAAGTGCTAAAACAGACCACATTATATCTCATGGGCCAACTTTAACAATCATTATCAGGAGGATTGATATCATGGTTTTGATCCCTAGCTCAGTATTACTTTGTCTGACTGAAAACAATCCAGGTTTAAGTTAACCCGTGAGACTATCTGTTGGCATAAAAAGGCAATTTCGACAATCTTTTTCAAAGGGCGTGAAATTCTTAACAGTAAGGGATGATTCATTCTAGAACCAAAACAAAATAATGCAAACCATCTCTGGAGGATATTAGTTGCAAATTTACCCGATGGAATCCAACTGAAGTCAATGGGTGCATTCCAGATATAGGATATCAAAATATCATGTTGACGTCGTATCCTAGTATGTTAAAACACTTGTCCAGGTATTATAAAGATCGGATTTCATCAGTGAACTGTGCAGAATCTGTATATCTGGAACGCACCCAAAGGGTCAACATAGCGTCACCAGGAGGCGAGTTTGTTGGCCTCAGAATTCTTCCTCCTCTGAGCTGAGGTAGTTCTGCTTCTTCCTCACATTCCAGTGTAAACATTGGCTCAGGCTCTCAAACCAGTCGTTCACGGGGTCCCGGAAacagatggagggaacagggaagCAGG

Function

NR:

description
NAD kinase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1583781 True 2518 lncRNA 0.37 2 51913152 51915899

Neighbor

gene id symbol gene type direction distance location
LOC110492221 LOC106566882 coding downstream 174860 51721970 ~ 51738292 (-)
LOC110491091 LOC106566924 coding downstream 195195 51690883 ~ 51717957 (-)
LOC110492220 LOC106566883 coding downstream 309182 51522349 ~ 51603970 (-)
dffb LOC106566885 coding downstream 795302 51113403 ~ 51117850 (-)
LOC110492214 LOC106566770 coding downstream 809219 51101783 ~ 51103933 (-)
LOC110492226 LOC106572002 coding upstream 64715 51978399 ~ 51990025 (-)
LOC110492229 LOC106566874 coding upstream 82659 51998558 ~ 52069366 (-)
LOC110492230 NA coding upstream 157841 52073740 ~ 52077554 (-)
LOC110492234 LOC106566870 coding upstream 252916 52168815 ~ 52206285 (-)
plekhm2 LOC106566865 coding upstream 325699 52241598 ~ 52267535 (-)
G1386784 NA non-coding downstream 38781 51873961 ~ 51874371 (-)
G1386782 NA non-coding downstream 41055 51871890 ~ 51872097 (-)
G1386781 NA non-coding downstream 42145 51870691 ~ 51871007 (-)
G1386713 NA non-coding downstream 50966 51860329 ~ 51862186 (-)
G1386716 gnb2 non-coding downstream 60365 51849815 ~ 51852787 (-)
G1386804 NA non-coding upstream 2050 51917949 ~ 51918161 (-)
G1386806 NA non-coding upstream 6532 51922431 ~ 51922697 (-)
G1386842 NA non-coding upstream 52680 51968579 ~ 51970474 (-)
G1386852 NA non-coding upstream 79192 51995091 ~ 51995398 (-)
G1385888 NA other downstream 784504 51090645 ~ 51128648 (-)
G1385645 NA other downstream 857091 51055631 ~ 51056061 (-)
G1384875 NA other downstream 1847335 50064821 ~ 50065817 (-)
LOC110491086 LOC106566907 other downstream 2193613 49576512 ~ 49719539 (-)
spen LOC106566857 other upstream 502977 52379551 ~ 52428869 (-)
LOC110492250 LOC106566852 other upstream 655811 52566433 ~ 52577143 (-)
G1388236 NA other upstream 1116033 53031932 ~ 53032921 (-)
LOC110492299 LOC106566805 other upstream 1814438 53730164 ~ 53757019 (-)

Expression


Co-expression Network