Gene
RNA
| Item | Value |
|---|---|
| gene id | G1386804 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 51917949 ~ 51918161 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110532385 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1583832 | True | 213 | lncRNA | 0.53 | 1 | 51917949 | 51918161 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492221 | LOC106566882 | coding | downstream | 179657 | 51721970 ~ 51738292 (-) |
| LOC110491091 | LOC106566924 | coding | downstream | 199992 | 51690883 ~ 51717957 (-) |
| LOC110492220 | LOC106566883 | coding | downstream | 313979 | 51522349 ~ 51603970 (-) |
| dffb | LOC106566885 | coding | downstream | 800099 | 51113403 ~ 51117850 (-) |
| LOC110492214 | LOC106566770 | coding | downstream | 814016 | 51101783 ~ 51103933 (-) |
| LOC110492226 | LOC106572002 | coding | upstream | 62453 | 51978399 ~ 51990025 (-) |
| LOC110492229 | LOC106566874 | coding | upstream | 80397 | 51998558 ~ 52069366 (-) |
| LOC110492230 | NA | coding | upstream | 155579 | 52073740 ~ 52077554 (-) |
| LOC110492234 | LOC106566870 | coding | upstream | 250654 | 52168815 ~ 52206285 (-) |
| plekhm2 | LOC106566865 | coding | upstream | 323437 | 52241598 ~ 52267535 (-) |
| G1386762 | NA | non-coding | downstream | 2050 | 51913152 ~ 51915899 (-) |
| G1386784 | NA | non-coding | downstream | 43578 | 51873961 ~ 51874371 (-) |
| G1386782 | NA | non-coding | downstream | 45852 | 51871890 ~ 51872097 (-) |
| G1386781 | NA | non-coding | downstream | 46942 | 51870691 ~ 51871007 (-) |
| G1386713 | NA | non-coding | downstream | 55763 | 51860329 ~ 51862186 (-) |
| G1386806 | NA | non-coding | upstream | 4270 | 51922431 ~ 51922697 (-) |
| G1386842 | NA | non-coding | upstream | 50418 | 51968579 ~ 51970474 (-) |
| G1386852 | NA | non-coding | upstream | 76930 | 51995091 ~ 51995398 (-) |
| G1386877 | NA | non-coding | upstream | 152719 | 52070880 ~ 52071190 (-) |
| G1385888 | NA | other | downstream | 789301 | 51090645 ~ 51128648 (-) |
| G1385645 | NA | other | downstream | 861888 | 51055631 ~ 51056061 (-) |
| G1384875 | NA | other | downstream | 1852132 | 50064821 ~ 50065817 (-) |
| LOC110491086 | LOC106566907 | other | downstream | 2198410 | 49576512 ~ 49719539 (-) |
| spen | LOC106566857 | other | upstream | 500715 | 52379551 ~ 52428869 (-) |
| LOC110492250 | LOC106566852 | other | upstream | 653549 | 52566433 ~ 52577143 (-) |
| G1388236 | NA | other | upstream | 1113771 | 53031932 ~ 53032921 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 1812176 | 53730164 ~ 53757019 (-) |
