Gene
RNA
| Item | Value |
|---|---|
| gene id | G1386877 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 52070880 ~ 52071190 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1583916 | True | 311 | lncRNA | 0.38 | 1 | 52070880 | 52071190 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492229 | LOC106566874 | coding | downstream | 1514 | 51998558 ~ 52069366 (-) |
| LOC110492226 | LOC106572002 | coding | downstream | 80855 | 51978399 ~ 51990025 (-) |
| LOC110492221 | LOC106566882 | coding | downstream | 332588 | 51721970 ~ 51738292 (-) |
| LOC110491091 | LOC106566924 | coding | downstream | 352923 | 51690883 ~ 51717957 (-) |
| LOC110492220 | LOC106566883 | coding | downstream | 466910 | 51522349 ~ 51603970 (-) |
| LOC110492230 | NA | coding | upstream | 2550 | 52073740 ~ 52077554 (-) |
| LOC110492234 | LOC106566870 | coding | upstream | 97625 | 52168815 ~ 52206285 (-) |
| plekhm2 | LOC106566865 | coding | upstream | 170408 | 52241598 ~ 52267535 (-) |
| ddost | LOC106566864 | coding | upstream | 196545 | 52267735 ~ 52273001 (-) |
| zbtb17 | zbtb17 | coding | upstream | 202130 | 52273320 ~ 52281951 (-) |
| G1386852 | NA | non-coding | downstream | 75482 | 51995091 ~ 51995398 (-) |
| G1386842 | NA | non-coding | downstream | 100406 | 51968579 ~ 51970474 (-) |
| G1386806 | NA | non-coding | downstream | 148183 | 51922431 ~ 51922697 (-) |
| G1386804 | NA | non-coding | downstream | 152719 | 51917949 ~ 51918161 (-) |
| G1386881 | NA | non-coding | upstream | 8726 | 52079916 ~ 52080116 (-) |
| G1386882 | NA | non-coding | upstream | 8947 | 52080137 ~ 52080369 (-) |
| G1386887 | NA | non-coding | upstream | 13919 | 52085109 ~ 52085315 (-) |
| G1386888 | NA | non-coding | upstream | 14631 | 52085821 ~ 52086036 (-) |
| G1385888 | NA | other | downstream | 942232 | 51090645 ~ 51128648 (-) |
| dffb | LOC106566885 | other | downstream | 955815 | 51113403 ~ 51117850 (-) |
| G1385645 | NA | other | downstream | 1014819 | 51055631 ~ 51056061 (-) |
| G1384875 | NA | other | downstream | 2005063 | 50064821 ~ 50065817 (-) |
| spen | LOC106566857 | other | upstream | 347686 | 52379551 ~ 52428869 (-) |
| LOC110492250 | LOC106566852 | other | upstream | 500520 | 52566433 ~ 52577143 (-) |
| G1388236 | NA | other | upstream | 960742 | 53031932 ~ 53032921 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 1659147 | 53730164 ~ 53757019 (-) |
| G1389763 | NA | other | upstream | 2473538 | 54544728 ~ 54545243 (-) |
