Gene
RNA
| Item | Value |
|---|---|
| gene id | G1388036 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 52611801 ~ 52612137 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1585280 | True | 337 | lncRNA | 0.39 | 1 | 52611801 | 52612137 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492250 | LOC106566852 | coding | downstream | 34658 | 52566433 ~ 52577143 (-) |
| tmem240a | LOC106566854 | coding | downstream | 79576 | 52514283 ~ 52532225 (-) |
| LOC110492247 | LOC106566856 | coding | downstream | 108124 | 52489746 ~ 52503677 (-) |
| atp13a2 | atp13a2 | coding | downstream | 122536 | 52452964 ~ 52489265 (-) |
| tmem82 | LOC106566858 | coding | downstream | 171350 | 52436999 ~ 52440451 (-) |
| rassf11 | LOC106566932 | coding | upstream | 75422 | 52687559 ~ 52692433 (-) |
| LOC118939555 | NA | coding | upstream | 166358 | 52778495 ~ 52780254 (-) |
| LOC110491094 | LOC106566841 | coding | upstream | 192288 | 52804425 ~ 52837293 (-) |
| LOC110491095 | LOC106566922 | coding | upstream | 225591 | 52837728 ~ 52856339 (-) |
| LOC110492261 | LOC106566840 | coding | upstream | 253031 | 52865168 ~ 52874886 (-) |
| G1388025 | LOC106600668 | non-coding | downstream | 13403 | 52598160 ~ 52598398 (-) |
| G1388023 | NA | non-coding | downstream | 18023 | 52593568 ~ 52593778 (-) |
| G1386889 | NA | non-coding | downstream | 521969 | 52089251 ~ 52089832 (-) |
| G1386888 | NA | non-coding | downstream | 525765 | 52085821 ~ 52086036 (-) |
| G1386887 | NA | non-coding | downstream | 526486 | 52085109 ~ 52085315 (-) |
| LOC110491093 | LOC106572282 | non-coding | upstream | 5538 | 52606434 ~ 52618106 (-) |
| G1388044 | NA | non-coding | upstream | 28538 | 52640675 ~ 52640919 (-) |
| G1388050 | NA | non-coding | upstream | 34423 | 52646560 ~ 52646800 (-) |
| G1388104 | NA | non-coding | upstream | 126700 | 52738837 ~ 52739737 (-) |
| G1388105 | NA | non-coding | upstream | 127623 | 52739760 ~ 52739987 (-) |
| spen | LOC106566857 | other | downstream | 183042 | 52379551 ~ 52428869 (-) |
| LOC110492226 | LOC106572002 | other | downstream | 621806 | 51978399 ~ 51990025 (-) |
| G1385888 | NA | other | downstream | 1483153 | 51090645 ~ 51128648 (-) |
| G1388236 | NA | other | upstream | 419795 | 53031932 ~ 53032921 (-) |
| LOC110492299 | LOC106566805 | other | upstream | 1118200 | 53730164 ~ 53757019 (-) |
| G1389763 | NA | other | upstream | 1932591 | 54544728 ~ 54545243 (-) |
| G1390030 | ifrd2 | other | upstream | 2372681 | 54984818 ~ 54986263 (-) |
| LOC110492352 | nua4l | other | upstream | 3212022 | 55824155 ~ 55826646 (-) |
